Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Gpcpd1-202ENSMUST00000060955 3686 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim43aQ3TL54 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim43aQ3TL54 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim43aQ3TL54 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Trim43aQ3TL54 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC12.14□□□□□ -0.47
Trim43aQ3TL54 CT010447.1-201ENSMUST00000225657 1608 ntBASIC12.14□□□□□ -0.47
Trim43aQ3TL54 Kat6b-201ENSMUST00000069648 7649 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Trim43aQ3TL54 Gm10548-201ENSMUST00000097631 2629 ntBASIC12.14□□□□□ -0.47
Trim43aQ3TL54 Gm10699-201ENSMUST00000098916 2130 ntBASIC12.14□□□□□ -0.47
Trim43aQ3TL54 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim43aQ3TL54 Tmem231-201ENSMUST00000034429 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim43aQ3TL54 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trim43aQ3TL54 Gp2-201ENSMUST00000033255 1993 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim43aQ3TL54 Gm18798-201ENSMUST00000187264 1700 ntBASIC12.14□□□□□ -0.47
Trim43aQ3TL54 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC12.14□□□□□ -0.47
Trim43aQ3TL54 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim43aQ3TL54 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim43aQ3TL54 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Trim43aQ3TL54 Gm26868-201ENSMUST00000181927 2655 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trim43aQ3TL54 Smim1-214ENSMUST00000182191 3535 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trim43aQ3TL54 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim43aQ3TL54 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trim43aQ3TL54 AC123619.2-202ENSMUST00000225097 1568 ntBASIC12.13□□□□□ -0.47
Trim43aQ3TL54 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC12.13□□□□□ -0.47
Trim43aQ3TL54 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim43aQ3TL54 Tnip1-203ENSMUST00000102731 2973 ntAPPRIS P3 TSL 5 BASIC12.13□□□□□ -0.47
Trim43aQ3TL54 Zfp30-202ENSMUST00000122387 3342 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trim43aQ3TL54 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim43aQ3TL54 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim43aQ3TL54 Pex13-201ENSMUST00000020523 4146 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim43aQ3TL54 Gm44663-201ENSMUST00000206898 3150 ntBASIC12.13□□□□□ -0.47
Trim43aQ3TL54 Plekhn1-204ENSMUST00000218699 3196 ntTSL 2 BASIC12.13□□□□□ -0.47
Trim43aQ3TL54 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Trim43aQ3TL54 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim43aQ3TL54 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Trim43aQ3TL54 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
Trim43aQ3TL54 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC12.13□□□□□ -0.47
Trim43aQ3TL54 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC12.13□□□□□ -0.47
Trim43aQ3TL54 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC12.13□□□□□ -0.47
Trim43aQ3TL54 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trim43aQ3TL54 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Trim43aQ3TL54 Gm16570-201ENSMUST00000161951 436 ntBASIC12.13□□□□□ -0.47
Trim43aQ3TL54 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC12.13□□□□□ -0.47
Trim43aQ3TL54 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Trim43aQ3TL54 Gm43962-201ENSMUST00000203898 190 ntBASIC12.13□□□□□ -0.47
Trim43aQ3TL54 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trim43aQ3TL54 Gm45598-202ENSMUST00000210719 986 ntBASIC12.13□□□□□ -0.47
Trim43aQ3TL54 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC12.13□□□□□ -0.47
Trim43aQ3TL54 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Trim43aQ3TL54 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Trim43aQ3TL54 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Trim43aQ3TL54 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim43aQ3TL54 Alms1-ps2-202ENSMUST00000161983 2290 ntBASIC12.13□□□□□ -0.47
Trim43aQ3TL54 AI854703-201ENSMUST00000095938 3517 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Trim43aQ3TL54 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trim43aQ3TL54 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim43aQ3TL54 Shc1-210ENSMUST00000191485 3154 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim43aQ3TL54 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trim43aQ3TL54 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trim43aQ3TL54 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trim43aQ3TL54 Gm8752-201ENSMUST00000173427 1694 ntBASIC12.13□□□□□ -0.47
Trim43aQ3TL54 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim43aQ3TL54 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trim43aQ3TL54 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim43aQ3TL54 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Trim43aQ3TL54 Nfx1-201ENSMUST00000030133 4349 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trim43aQ3TL54 Angel1-201ENSMUST00000021682 3850 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim43aQ3TL54 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Trim43aQ3TL54 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Trim43aQ3TL54 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Trim43aQ3TL54 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trim43aQ3TL54 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Trim43aQ3TL54 Ctcfl-202ENSMUST00000179693 3174 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Trim43aQ3TL54 Vstm2a-201ENSMUST00000109645 3264 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim43aQ3TL54 Tctn3-201ENSMUST00000025981 2743 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim43aQ3TL54 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim43aQ3TL54 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim43aQ3TL54 Slc13a5-202ENSMUST00000137701 1746 ntTSL 5 BASIC12.12□□□□□ -0.47
Trim43aQ3TL54 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim43aQ3TL54 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Trim43aQ3TL54 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim43aQ3TL54 Gm14130-201ENSMUST00000118417 987 ntBASIC12.12□□□□□ -0.47
Trim43aQ3TL54 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trim43aQ3TL54 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Trim43aQ3TL54 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC12.12□□□□□ -0.47
Trim43aQ3TL54 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC12.12□□□□□ -0.47
Trim43aQ3TL54 Gm8885-201ENSMUST00000189382 598 ntBASIC12.12□□□□□ -0.47
Trim43aQ3TL54 Rps4l-202ENSMUST00000204242 789 ntBASIC12.12□□□□□ -0.47
Trim43aQ3TL54 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC12.12□□□□□ -0.47
Trim43aQ3TL54 Gm18056-201ENSMUST00000207670 568 ntBASIC12.12□□□□□ -0.47
Trim43aQ3TL54 Gm18061-201ENSMUST00000208350 562 ntBASIC12.12□□□□□ -0.47
Trim43aQ3TL54 Gm18063-201ENSMUST00000208529 568 ntBASIC12.12□□□□□ -0.47
Trim43aQ3TL54 Gm18052-201ENSMUST00000208750 559 ntBASIC12.12□□□□□ -0.47
Trim43aQ3TL54 Gm18212-201ENSMUST00000211678 889 ntBASIC12.12□□□□□ -0.47
Trim43aQ3TL54 CT485787.1-201ENSMUST00000225617 968 ntBASIC12.12□□□□□ -0.47
Trim43aQ3TL54 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim43aQ3TL54 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim43aQ3TL54 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim43aQ3TL54 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim43aQ3TL54 Gm11033-203ENSMUST00000156185 2321 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms