Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Gm21874-202ENSMUST00000190315 1538 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Trim63Q38HM4 Helb-201ENSMUST00000020449 4554 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trim63Q38HM4 Iqgap3-204ENSMUST00000194440 3263 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Trim63Q38HM4 Cd160-203ENSMUST00000165991 2458 ntAPPRIS ALT2 TSL 3 BASIC9.36□□□□□ -0.91
Trim63Q38HM4 Hinfp-205ENSMUST00000216508 5333 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trim63Q38HM4 Ctnnd1-209ENSMUST00000111678 5870 ntTSL 5 BASIC9.35□□□□□ -0.91
Trim63Q38HM4 Kirrel3-205ENSMUST00000187182 3532 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trim63Q38HM4 Ammecr1l-201ENSMUST00000115808 4769 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trim63Q38HM4 Gm6018-201ENSMUST00000216090 1306 ntBASIC9.35□□□□□ -0.91
Trim63Q38HM4 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trim63Q38HM4 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trim63Q38HM4 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trim63Q38HM4 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Trim63Q38HM4 Gpr37-202ENSMUST00000200812 3035 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Trim63Q38HM4 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Trim63Q38HM4 Ccdc15-202ENSMUST00000213633 3331 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
Trim63Q38HM4 Tmem63a-201ENSMUST00000027800 3306 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trim63Q38HM4 Zfp709-203ENSMUST00000188685 7186 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trim63Q38HM4 Aplp2-201ENSMUST00000072634 3634 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trim63Q38HM4 Slc16a5-202ENSMUST00000106532 2062 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trim63Q38HM4 Mmgt1-201ENSMUST00000059899 4234 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trim63Q38HM4 Pcdh15-216ENSMUST00000131724 6322 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
Trim63Q38HM4 Sox5-205ENSMUST00000111749 3879 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Trim63Q38HM4 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
Trim63Q38HM4 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
Trim63Q38HM4 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Trim63Q38HM4 Mup-ps23-201ENSMUST00000118063 630 ntBASIC9.35□□□□□ -0.91
Trim63Q38HM4 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC9.35□□□□□ -0.91
Trim63Q38HM4 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC9.35□□□□□ -0.91
Trim63Q38HM4 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC9.35□□□□□ -0.91
Trim63Q38HM4 Adar-205ENSMUST00000121094 2321 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Trim63Q38HM4 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Trim63Q38HM4 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Trim63Q38HM4 Gm9727-201ENSMUST00000161387 555 ntBASIC9.35□□□□□ -0.91
Trim63Q38HM4 Gm18733-201ENSMUST00000173950 856 ntBASIC9.35□□□□□ -0.91
Trim63Q38HM4 Gm6652-201ENSMUST00000186414 1070 ntBASIC9.35□□□□□ -0.91
Trim63Q38HM4 1700001J11Rik-202ENSMUST00000190330 2463 ntBASIC9.35□□□□□ -0.91
Trim63Q38HM4 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC9.35□□□□□ -0.91
Trim63Q38HM4 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Trim63Q38HM4 Ss18l2-206ENSMUST00000215966 2316 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Trim63Q38HM4 Gm46209-201ENSMUST00000217912 553 ntBASIC9.35□□□□□ -0.91
Trim63Q38HM4 AC153974.2-201ENSMUST00000218577 1025 ntBASIC9.35□□□□□ -0.91
Trim63Q38HM4 AC131081.1-201ENSMUST00000219535 1736 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Trim63Q38HM4 AC102569.1-204ENSMUST00000222816 793 ntTSL 3 BASIC9.35□□□□□ -0.91
Trim63Q38HM4 AC131710.1-201ENSMUST00000228336 990 ntBASIC9.35□□□□□ -0.91
Trim63Q38HM4 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trim63Q38HM4 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trim63Q38HM4 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trim63Q38HM4 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trim63Q38HM4 Myo18a-209ENSMUST00000108376 7374 ntTSL 5 BASIC9.35□□□□□ -0.91
Trim63Q38HM4 Zfp462-201ENSMUST00000030131 4823 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
Trim63Q38HM4 Lamp2-202ENSMUST00000061755 3604 ntAPPRIS P5 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trim63Q38HM4 Rac2-201ENSMUST00000043214 3036 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trim63Q38HM4 Srpx2-201ENSMUST00000033606 2290 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trim63Q38HM4 Fam122b-201ENSMUST00000071023 4334 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trim63Q38HM4 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trim63Q38HM4 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trim63Q38HM4 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Trim63Q38HM4 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trim63Q38HM4 Gm43447-201ENSMUST00000198471 1535 ntBASIC9.35□□□□□ -0.91
Trim63Q38HM4 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC9.35□□□□□ -0.91
Trim63Q38HM4 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trim63Q38HM4 Gys1-206ENSMUST00000211150 2681 ntTSL 5 BASIC9.35□□□□□ -0.91
Trim63Q38HM4 Aagab-201ENSMUST00000041551 5294 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trim63Q38HM4 Rnf121-203ENSMUST00000106953 2545 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Trim63Q38HM4 Eif2ak4-205ENSMUST00000110872 4907 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Trim63Q38HM4 Eya3-202ENSMUST00000079157 5186 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trim63Q38HM4 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trim63Q38HM4 2410089E03Rik-201ENSMUST00000110617 10469 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Trim63Q38HM4 Anapc1-201ENSMUST00000014499 8942 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trim63Q38HM4 Thbs1-201ENSMUST00000039559 5848 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trim63Q38HM4 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trim63Q38HM4 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
Trim63Q38HM4 C130021I20Rik-201ENSMUST00000147294 3693 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Trim63Q38HM4 Rho-201ENSMUST00000032471 4621 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trim63Q38HM4 Txk-206ENSMUST00000198464 2271 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Trim63Q38HM4 Pygl-201ENSMUST00000071250 2825 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trim63Q38HM4 Gm19967-201ENSMUST00000179676 2138 ntTSL 5 BASIC9.34□□□□□ -0.91
Trim63Q38HM4 Olfr95-201ENSMUST00000060728 5129 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
Trim63Q38HM4 4930417O13Rik-203ENSMUST00000204911 3458 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Trim63Q38HM4 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trim63Q38HM4 Rab2b-201ENSMUST00000022765 2906 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trim63Q38HM4 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trim63Q38HM4 Gm16070-201ENSMUST00000127328 5210 ntTSL 2 BASIC9.34□□□□□ -0.91
Trim63Q38HM4 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Trim63Q38HM4 Olfr1278-206ENSMUST00000216229 6819 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Trim63Q38HM4 Ptbp3-202ENSMUST00000102883 3409 ntAPPRIS P4 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trim63Q38HM4 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Trim63Q38HM4 Gm12260-201ENSMUST00000122447 411 ntBASIC9.34□□□□□ -0.91
Trim63Q38HM4 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Trim63Q38HM4 Pla2g1b-204ENSMUST00000145785 419 ntTSL 5 BASIC9.34□□□□□ -0.91
Trim63Q38HM4 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Trim63Q38HM4 Gm23757-201ENSMUST00000158353 100 ntBASIC9.34□□□□□ -0.91
Trim63Q38HM4 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC9.34□□□□□ -0.91
Trim63Q38HM4 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Trim63Q38HM4 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC9.34□□□□□ -0.91
Trim63Q38HM4 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC9.34□□□□□ -0.91
Trim63Q38HM4 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trim63Q38HM4 AC133598.3-202ENSMUST00000224219 531 ntBASIC9.34□□□□□ -0.91
Trim63Q38HM4 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms