Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC11.64□□□□□ -0.55
Ebf1Q07802 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ebf1Q07802 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC11.64□□□□□ -0.55
Ebf1Q07802 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ebf1Q07802 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Ebf1Q07802 Gm45776-201ENSMUST00000212366 1522 ntBASIC11.64□□□□□ -0.55
Ebf1Q07802 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Ebf1Q07802 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ebf1Q07802 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Ebf1Q07802 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Ebf1Q07802 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ebf1Q07802 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ebf1Q07802 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
Ebf1Q07802 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ebf1Q07802 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ebf1Q07802 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ebf1Q07802 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC11.64□□□□□ -0.55
Ebf1Q07802 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Ebf1Q07802 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ebf1Q07802 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC11.63□□□□□ -0.55
Ebf1Q07802 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Ebf1Q07802 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
Ebf1Q07802 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ebf1Q07802 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ebf1Q07802 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Ebf1Q07802 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Ebf1Q07802 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC11.63□□□□□ -0.55
Ebf1Q07802 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Ebf1Q07802 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Ebf1Q07802 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ebf1Q07802 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Ebf1Q07802 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ebf1Q07802 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Ebf1Q07802 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ebf1Q07802 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Ebf1Q07802 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC11.63□□□□□ -0.55
Ebf1Q07802 Rbmx2-ps-201ENSMUST00000119377 930 ntBASIC11.63□□□□□ -0.55
Ebf1Q07802 Gm12969-201ENSMUST00000120199 1004 ntBASIC11.63□□□□□ -0.55
Ebf1Q07802 Gm13022-201ENSMUST00000121181 285 ntBASIC11.63□□□□□ -0.55
Ebf1Q07802 Gm11244-201ENSMUST00000121243 237 ntBASIC11.63□□□□□ -0.55
Ebf1Q07802 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC11.63□□□□□ -0.55
Ebf1Q07802 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC11.63□□□□□ -0.55
Ebf1Q07802 Taar8c-201ENSMUST00000170267 1035 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Ebf1Q07802 Ighv2-1-201ENSMUST00000170946 353 ntBASIC11.63□□□□□ -0.55
Ebf1Q07802 Gm20536-201ENSMUST00000172588 406 ntTSL 3 BASIC11.63□□□□□ -0.55
Ebf1Q07802 Gm17798-201ENSMUST00000182282 1035 ntBASIC11.63□□□□□ -0.55
Ebf1Q07802 Gm9135-201ENSMUST00000182963 990 ntBASIC11.63□□□□□ -0.55
Ebf1Q07802 Gm19087-201ENSMUST00000191430 946 ntBASIC11.63□□□□□ -0.55
Ebf1Q07802 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC11.63□□□□□ -0.55
Ebf1Q07802 Gm3017-201ENSMUST00000203603 1126 ntBASIC11.63□□□□□ -0.55
Ebf1Q07802 Gm45758-201ENSMUST00000212448 1006 ntBASIC11.63□□□□□ -0.55
Ebf1Q07802 Mgp-201ENSMUST00000032342 617 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ebf1Q07802 Taar8a-201ENSMUST00000051133 1035 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Ebf1Q07802 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ebf1Q07802 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ebf1Q07802 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ebf1Q07802 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ebf1Q07802 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC11.63□□□□□ -0.55
Ebf1Q07802 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ebf1Q07802 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ebf1Q07802 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Ebf1Q07802 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ebf1Q07802 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ebf1Q07802 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Ebf1Q07802 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Ebf1Q07802 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Ebf1Q07802 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Ebf1Q07802 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ebf1Q07802 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ebf1Q07802 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Ebf1Q07802 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Ebf1Q07802 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ebf1Q07802 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ebf1Q07802 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ebf1Q07802 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC11.62□□□□□ -0.55
Ebf1Q07802 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC11.62□□□□□ -0.55
Ebf1Q07802 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC11.62□□□□□ -0.55
Ebf1Q07802 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Ebf1Q07802 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ebf1Q07802 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ebf1Q07802 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Ebf1Q07802 Zfp667-204ENSMUST00000153840 596 ntTSL 3 BASIC11.62□□□□□ -0.55
Ebf1Q07802 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ebf1Q07802 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ebf1Q07802 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Ebf1Q07802 Gm5621-201ENSMUST00000187303 640 ntBASIC11.62□□□□□ -0.55
Ebf1Q07802 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC11.62□□□□□ -0.55
Ebf1Q07802 Gm37013-201ENSMUST00000194544 313 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Ebf1Q07802 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC11.62□□□□□ -0.55
Ebf1Q07802 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC11.62□□□□□ -0.55
Ebf1Q07802 Rpl10-ps3-201ENSMUST00000076364 768 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Ebf1Q07802 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Ebf1Q07802 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Ebf1Q07802 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ebf1Q07802 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ebf1Q07802 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ebf1Q07802 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Ebf1Q07802 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Ebf1Q07802 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ebf1Q07802 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms