Protein–RNA interactions for Protein: Q03958

Pfdn6, Prefoldin subunit 6, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn6Q03958 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Pfdn6Q03958 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC11.52□□□□□ -0.57
Pfdn6Q03958 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC11.52□□□□□ -0.57
Pfdn6Q03958 Gm44755-201ENSMUST00000207830 2102 ntBASIC11.52□□□□□ -0.57
Pfdn6Q03958 Gm45575-201ENSMUST00000210283 548 ntBASIC11.52□□□□□ -0.57
Pfdn6Q03958 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC11.52□□□□□ -0.57
Pfdn6Q03958 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC11.52□□□□□ -0.57
Pfdn6Q03958 Gm7293-201ENSMUST00000216682 1007 ntBASIC11.52□□□□□ -0.57
Pfdn6Q03958 Lect2-202ENSMUST00000225183 823 ntBASIC11.52□□□□□ -0.57
Pfdn6Q03958 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pfdn6Q03958 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pfdn6Q03958 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Pfdn6Q03958 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pfdn6Q03958 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pfdn6Q03958 Scn5a-203ENSMUST00000120420 7536 ntAPPRIS ALT1 TSL 5 BASIC11.52□□□□□ -0.57
Pfdn6Q03958 AC174678.2-201ENSMUST00000156420 3275 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Pfdn6Q03958 Ptpn21-202ENSMUST00000170188 5562 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pfdn6Q03958 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pfdn6Q03958 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Pfdn6Q03958 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Pfdn6Q03958 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Pfdn6Q03958 Slc6a18-201ENSMUST00000022105 2839 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Pfdn6Q03958 Slc29a3-201ENSMUST00000117513 5240 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pfdn6Q03958 Nup50-201ENSMUST00000165443 4741 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pfdn6Q03958 Gm13347-201ENSMUST00000120298 1353 ntBASIC11.52□□□□□ -0.57
Pfdn6Q03958 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC11.52□□□□□ -0.57
Pfdn6Q03958 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pfdn6Q03958 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Pfdn6Q03958 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pfdn6Q03958 Hivep1-201ENSMUST00000060148 8753 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Pfdn6Q03958 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Pfdn6Q03958 Prdm16-203ENSMUST00000097759 8544 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Pfdn6Q03958 Zfp217-201ENSMUST00000063710 5685 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pfdn6Q03958 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pfdn6Q03958 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Pfdn6Q03958 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Pfdn6Q03958 Gm16070-201ENSMUST00000127328 5210 ntTSL 2 BASIC11.51□□□□□ -0.57
Pfdn6Q03958 Gm38089-201ENSMUST00000193585 1514 ntBASIC11.51□□□□□ -0.57
Pfdn6Q03958 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pfdn6Q03958 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pfdn6Q03958 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC11.51□□□□□ -0.57
Pfdn6Q03958 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pfdn6Q03958 Enam-201ENSMUST00000031222 5483 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pfdn6Q03958 Erlin2-201ENSMUST00000033873 4838 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pfdn6Q03958 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Pfdn6Q03958 1810014B01Rik-202ENSMUST00000218095 1622 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Pfdn6Q03958 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC11.51□□□□□ -0.57
Pfdn6Q03958 Gm13263-201ENSMUST00000121271 838 ntBASIC11.51□□□□□ -0.57
Pfdn6Q03958 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC11.51□□□□□ -0.57
Pfdn6Q03958 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pfdn6Q03958 Gm17040-202ENSMUST00000170597 889 ntBASIC11.51□□□□□ -0.57
Pfdn6Q03958 H2-Q3-201ENSMUST00000172583 608 ntBASIC11.51□□□□□ -0.57
Pfdn6Q03958 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC11.51□□□□□ -0.57
Pfdn6Q03958 CT030182.1-201ENSMUST00000225935 533 ntBASIC11.51□□□□□ -0.57
Pfdn6Q03958 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pfdn6Q03958 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pfdn6Q03958 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Pfdn6Q03958 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Pfdn6Q03958 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pfdn6Q03958 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pfdn6Q03958 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC11.51□□□□□ -0.57
Pfdn6Q03958 Gm13812-201ENSMUST00000118061 1347 ntBASIC11.51□□□□□ -0.57
Pfdn6Q03958 Gm13810-201ENSMUST00000118584 1347 ntBASIC11.51□□□□□ -0.57
Pfdn6Q03958 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC11.51□□□□□ -0.57
Pfdn6Q03958 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pfdn6Q03958 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pfdn6Q03958 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pfdn6Q03958 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pfdn6Q03958 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC11.51□□□□□ -0.57
Pfdn6Q03958 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pfdn6Q03958 Pak7-201ENSMUST00000035264 4848 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pfdn6Q03958 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pfdn6Q03958 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Pfdn6Q03958 Vwa5b2-202ENSMUST00000096197 4527 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Pfdn6Q03958 E130308A19Rik-202ENSMUST00000070150 10856 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pfdn6Q03958 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Pfdn6Q03958 Bahcc1-203ENSMUST00000122148 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pfdn6Q03958 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pfdn6Q03958 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Pfdn6Q03958 Zfp174-201ENSMUST00000041778 5897 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pfdn6Q03958 Myt1l-201ENSMUST00000021009 5027 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pfdn6Q03958 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Pfdn6Q03958 Stard4-201ENSMUST00000025236 5097 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pfdn6Q03958 Myo18a-223ENSMUST00000169105 6475 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pfdn6Q03958 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pfdn6Q03958 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Pfdn6Q03958 Tiam2-201ENSMUST00000072156 6127 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pfdn6Q03958 Furin-202ENSMUST00000120753 4332 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Pfdn6Q03958 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pfdn6Q03958 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
Pfdn6Q03958 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pfdn6Q03958 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC11.5□□□□□ -0.57
Pfdn6Q03958 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pfdn6Q03958 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pfdn6Q03958 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Pfdn6Q03958 Spata31d1a-203ENSMUST00000224982 5325 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Pfdn6Q03958 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC11.5□□□□□ -0.57
Pfdn6Q03958 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Pfdn6Q03958 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Pfdn6Q03958 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC11.5□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms