Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC9.83□□□□□ -0.84
Col8a1Q00780 Gm13722-201ENSMUST00000117964 3066 ntBASIC9.83□□□□□ -0.84
Col8a1Q00780 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Col8a1Q00780 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Col8a1Q00780 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Col8a1Q00780 CT025624.1-201ENSMUST00000224007 2700 ntBASIC9.83□□□□□ -0.84
Col8a1Q00780 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Col8a1Q00780 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Col8a1Q00780 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Col8a1Q00780 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Col8a1Q00780 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC9.82□□□□□ -0.84
Col8a1Q00780 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
Col8a1Q00780 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Col8a1Q00780 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Col8a1Q00780 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC9.82□□□□□ -0.84
Col8a1Q00780 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Col8a1Q00780 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Col8a1Q00780 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Col8a1Q00780 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Col8a1Q00780 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
Col8a1Q00780 CT009757.3-201ENSMUST00000223367 2320 ntBASIC9.82□□□□□ -0.84
Col8a1Q00780 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC9.82□□□□□ -0.84
Col8a1Q00780 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Col8a1Q00780 Gm24279-201ENSMUST00000104236 131 ntBASIC9.82□□□□□ -0.84
Col8a1Q00780 Gm12274-201ENSMUST00000120062 385 ntBASIC9.82□□□□□ -0.84
Col8a1Q00780 Tnfrsf14-201ENSMUST00000123514 1018 ntAPPRIS P2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Col8a1Q00780 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC9.82□□□□□ -0.84
Col8a1Q00780 Gm28038-201ENSMUST00000143119 378 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Col8a1Q00780 Gm16240-201ENSMUST00000161924 614 ntTSL 2 BASIC9.82□□□□□ -0.84
Col8a1Q00780 Psme1-208ENSMUST00000174259 1112 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Col8a1Q00780 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC9.82□□□□□ -0.84
Col8a1Q00780 Gm37365-201ENSMUST00000193109 409 ntBASIC9.82□□□□□ -0.84
Col8a1Q00780 Gm7504-201ENSMUST00000201449 424 ntBASIC9.82□□□□□ -0.84
Col8a1Q00780 Gm30731-201ENSMUST00000203909 825 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Col8a1Q00780 Gm44216-201ENSMUST00000203942 157 ntBASIC9.82□□□□□ -0.84
Col8a1Q00780 Gm39397-201ENSMUST00000212331 228 ntTSL 5 BASIC9.82□□□□□ -0.84
Col8a1Q00780 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Col8a1Q00780 Mrps11-201ENSMUST00000032840 1056 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Col8a1Q00780 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Col8a1Q00780 Rhox8-201ENSMUST00000071885 1204 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Col8a1Q00780 Olfr538-201ENSMUST00000084457 933 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
Col8a1Q00780 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC9.82□□□□□ -0.84
Col8a1Q00780 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Col8a1Q00780 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Col8a1Q00780 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
Col8a1Q00780 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Col8a1Q00780 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
Col8a1Q00780 Gm44260-201ENSMUST00000204946 2094 ntBASIC9.82□□□□□ -0.84
Col8a1Q00780 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC9.82□□□□□ -0.84
Col8a1Q00780 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Col8a1Q00780 Gm45011-201ENSMUST00000207620 2297 ntBASIC9.82□□□□□ -0.84
Col8a1Q00780 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Col8a1Q00780 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Col8a1Q00780 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC9.82□□□□□ -0.84
Col8a1Q00780 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Col8a1Q00780 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Col8a1Q00780 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Col8a1Q00780 Gm3052-202ENSMUST00000188254 2224 ntBASIC9.82□□□□□ -0.84
Col8a1Q00780 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Col8a1Q00780 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Col8a1Q00780 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Col8a1Q00780 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Col8a1Q00780 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Col8a1Q00780 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Col8a1Q00780 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Col8a1Q00780 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Col8a1Q00780 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Col8a1Q00780 Armcx4-201ENSMUST00000124226 7996 ntAPPRIS P1 TSL 2 BASIC9.81□□□□□ -0.84
Col8a1Q00780 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
Col8a1Q00780 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Col8a1Q00780 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Col8a1Q00780 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
Col8a1Q00780 4930555A03Rik-201ENSMUST00000196052 1556 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Col8a1Q00780 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Col8a1Q00780 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Col8a1Q00780 Gm18227-201ENSMUST00000211082 1468 ntBASIC9.81□□□□□ -0.84
Col8a1Q00780 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Col8a1Q00780 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Col8a1Q00780 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Col8a1Q00780 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Col8a1Q00780 Unc119-202ENSMUST00000100755 933 ntTSL 2 BASIC9.81□□□□□ -0.84
Col8a1Q00780 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
Col8a1Q00780 Gm14255-201ENSMUST00000128846 248 ntTSL 5 BASIC9.81□□□□□ -0.84
Col8a1Q00780 Gm14232-201ENSMUST00000137176 446 ntTSL 3 BASIC9.81□□□□□ -0.84
Col8a1Q00780 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
Col8a1Q00780 Gm12906-201ENSMUST00000154610 441 ntBASIC9.81□□□□□ -0.84
Col8a1Q00780 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC9.81□□□□□ -0.84
Col8a1Q00780 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC9.81□□□□□ -0.84
Col8a1Q00780 Gm20614-201ENSMUST00000177106 632 ntBASIC9.81□□□□□ -0.84
Col8a1Q00780 Gm26555-201ENSMUST00000180452 1037 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Col8a1Q00780 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Col8a1Q00780 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Col8a1Q00780 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC9.81□□□□□ -0.84
Col8a1Q00780 AI463170-202ENSMUST00000218453 558 ntTSL 2 BASIC9.81□□□□□ -0.84
Col8a1Q00780 Adipoq-201ENSMUST00000023593 1292 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Col8a1Q00780 Taar7f-201ENSMUST00000071691 1077 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
Col8a1Q00780 Taar7d-201ENSMUST00000092657 1077 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
Col8a1Q00780 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Col8a1Q00780 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Col8a1Q00780 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms