Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Ppp2r5c-205ENSMUST00000221715 2367 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Smarcc1P97496 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smarcc1P97496 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Smarcc1P97496 Gm18263-201ENSMUST00000220846 1928 ntBASIC14.33□□□□□ -0.12
Smarcc1P97496 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smarcc1P97496 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smarcc1P97496 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Smarcc1P97496 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smarcc1P97496 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smarcc1P97496 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smarcc1P97496 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Smarcc1P97496 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC14.32□□□□□ -0.12
Smarcc1P97496 Gm7224-201ENSMUST00000121359 2066 ntBASIC14.32□□□□□ -0.12
Smarcc1P97496 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smarcc1P97496 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC14.32□□□□□ -0.12
Smarcc1P97496 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smarcc1P97496 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Smarcc1P97496 AC138329.2-201ENSMUST00000225579 1842 ntBASIC14.32□□□□□ -0.12
Smarcc1P97496 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smarcc1P97496 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smarcc1P97496 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smarcc1P97496 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Smarcc1P97496 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smarcc1P97496 Mir181d-201ENSMUST00000102383 72 ntBASIC14.32□□□□□ -0.12
Smarcc1P97496 Gm22937-201ENSMUST00000103954 131 ntBASIC14.32□□□□□ -0.12
Smarcc1P97496 Gm14740-201ENSMUST00000118538 1150 ntBASIC14.32□□□□□ -0.12
Smarcc1P97496 Gm6630-201ENSMUST00000119199 454 ntBASIC14.32□□□□□ -0.12
Smarcc1P97496 Gm13204-201ENSMUST00000120110 821 ntBASIC14.32□□□□□ -0.12
Smarcc1P97496 Isg20-203ENSMUST00000120331 845 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smarcc1P97496 Gm14052-201ENSMUST00000121434 1031 ntBASIC14.32□□□□□ -0.12
Smarcc1P97496 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Smarcc1P97496 Nmbr-207ENSMUST00000190751 921 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Smarcc1P97496 Gm37452-201ENSMUST00000194416 1160 ntBASIC14.32□□□□□ -0.12
Smarcc1P97496 Gm31274-201ENSMUST00000197356 229 ntBASIC14.32□□□□□ -0.12
Smarcc1P97496 Gm43506-201ENSMUST00000200675 753 ntBASIC14.32□□□□□ -0.12
Smarcc1P97496 AC122860.1-201ENSMUST00000217669 773 ntTSL 3 BASIC14.32□□□□□ -0.12
Smarcc1P97496 Nnmt-201ENSMUST00000034808 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smarcc1P97496 Gm25580-201ENSMUST00000083409 327 ntBASIC14.32□□□□□ -0.12
Smarcc1P97496 Krtap12-1-201ENSMUST00000092370 656 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Smarcc1P97496 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smarcc1P97496 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smarcc1P97496 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smarcc1P97496 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smarcc1P97496 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smarcc1P97496 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smarcc1P97496 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Smarcc1P97496 Rufy2-204ENSMUST00000131718 2816 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Smarcc1P97496 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smarcc1P97496 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Smarcc1P97496 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smarcc1P97496 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smarcc1P97496 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smarcc1P97496 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smarcc1P97496 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smarcc1P97496 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
Smarcc1P97496 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smarcc1P97496 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Smarcc1P97496 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smarcc1P97496 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smarcc1P97496 Gm7841-201ENSMUST00000122108 1629 ntBASIC14.31□□□□□ -0.12
Smarcc1P97496 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smarcc1P97496 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smarcc1P97496 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smarcc1P97496 Gm45012-201ENSMUST00000208323 1666 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Smarcc1P97496 Gm5053-201ENSMUST00000208361 1678 ntBASIC14.31□□□□□ -0.12
Smarcc1P97496 Trav12-3-201ENSMUST00000103657 442 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Smarcc1P97496 S100a3-201ENSMUST00000001047 712 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smarcc1P97496 Fam107b-202ENSMUST00000115052 861 ntTSL 3 BASIC14.31□□□□□ -0.12
Smarcc1P97496 Hyal1-203ENSMUST00000123005 843 ntTSL 3 BASIC14.31□□□□□ -0.12
Smarcc1P97496 Tnfrsf14-201ENSMUST00000123514 1018 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smarcc1P97496 Gm27956-201ENSMUST00000175604 260 ntBASIC14.31□□□□□ -0.12
Smarcc1P97496 Ly6e-207ENSMUST00000187606 735 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Smarcc1P97496 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC14.31□□□□□ -0.12
Smarcc1P97496 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC14.31□□□□□ -0.12
Smarcc1P97496 Gm6606-201ENSMUST00000193613 947 ntBASIC14.31□□□□□ -0.12
Smarcc1P97496 Nme6-214ENSMUST00000200468 865 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Smarcc1P97496 Gm7939-201ENSMUST00000201233 1050 ntBASIC14.31□□□□□ -0.12
Smarcc1P97496 Gm42599-201ENSMUST00000201308 469 ntBASIC14.31□□□□□ -0.12
Smarcc1P97496 BC080696-201ENSMUST00000202858 1218 ntBASIC14.31□□□□□ -0.12
Smarcc1P97496 Gm13539-202ENSMUST00000211245 552 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Smarcc1P97496 AC138716.2-201ENSMUST00000226670 1016 ntBASIC14.31□□□□□ -0.12
Smarcc1P97496 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smarcc1P97496 Naca-201ENSMUST00000073868 885 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smarcc1P97496 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smarcc1P97496 Hist1h2bl-201ENSMUST00000091756 381 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Smarcc1P97496 Gm43417-201ENSMUST00000201586 5207 ntBASIC14.31□□□□□ -0.12
Smarcc1P97496 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smarcc1P97496 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smarcc1P97496 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC14.31□□□□□ -0.12
Smarcc1P97496 Gm5308-201ENSMUST00000196752 1354 ntBASIC14.31□□□□□ -0.12
Smarcc1P97496 Ceacam9-201ENSMUST00000001984 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smarcc1P97496 Gm9915-201ENSMUST00000066196 1383 ntBASIC14.31□□□□□ -0.12
Smarcc1P97496 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smarcc1P97496 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smarcc1P97496 Gm14005-210ENSMUST00000225087 1413 ntBASIC14.31□□□□□ -0.12
Smarcc1P97496 AC108858.2-201ENSMUST00000228186 1425 ntBASIC14.31□□□□□ -0.12
Smarcc1P97496 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smarcc1P97496 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Smarcc1P97496 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Smarcc1P97496 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms