Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Tfap2b-204ENSMUST00000187754 3023 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Shox2P70390 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Shox2P70390 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Shox2P70390 Gm7742-201ENSMUST00000167648 1527 ntBASIC11.25□□□□□ -0.61
Shox2P70390 Gm7732-201ENSMUST00000170486 1527 ntBASIC11.25□□□□□ -0.61
Shox2P70390 Gm7740-201ENSMUST00000186171 1527 ntBASIC11.25□□□□□ -0.61
Shox2P70390 Gm7736-201ENSMUST00000096981 1527 ntBASIC11.25□□□□□ -0.61
Shox2P70390 Adar-205ENSMUST00000121094 2321 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Shox2P70390 Wipf1-203ENSMUST00000102680 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Shox2P70390 Gm44798-201ENSMUST00000208123 2410 ntBASIC11.25□□□□□ -0.61
Shox2P70390 Cdkal1-202ENSMUST00000091674 2427 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Shox2P70390 Spata16-201ENSMUST00000047005 2022 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Shox2P70390 Sh3bgrl-201ENSMUST00000033598 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Shox2P70390 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC11.25□□□□□ -0.61
Shox2P70390 Metap1-203ENSMUST00000197531 3708 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Shox2P70390 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Shox2P70390 Gm26625-201ENSMUST00000181519 2538 ntTSL 5 BASIC11.25□□□□□ -0.61
Shox2P70390 Eif2s2-201ENSMUST00000099173 2542 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Shox2P70390 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Shox2P70390 Gm11930-201ENSMUST00000117788 190 ntBASIC11.25□□□□□ -0.61
Shox2P70390 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC11.25□□□□□ -0.61
Shox2P70390 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Shox2P70390 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC11.25□□□□□ -0.61
Shox2P70390 Csrnp3-208ENSMUST00000176109 2958 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Shox2P70390 Gm19412-201ENSMUST00000185388 436 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Shox2P70390 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Shox2P70390 Gm6450-201ENSMUST00000200896 574 ntBASIC11.25□□□□□ -0.61
Shox2P70390 Gm8956-201ENSMUST00000203939 825 ntBASIC11.25□□□□□ -0.61
Shox2P70390 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
Shox2P70390 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC11.25□□□□□ -0.61
Shox2P70390 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Shox2P70390 Gm9004-201ENSMUST00000218739 1222 ntBASIC11.25□□□□□ -0.61
Shox2P70390 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Shox2P70390 CT030657.3-201ENSMUST00000222707 1200 ntBASIC11.25□□□□□ -0.61
Shox2P70390 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Shox2P70390 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Shox2P70390 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Shox2P70390 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Shox2P70390 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Shox2P70390 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Shox2P70390 Gm13126-201ENSMUST00000117079 3063 ntBASIC11.25□□□□□ -0.61
Shox2P70390 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Shox2P70390 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Shox2P70390 Ndrg4-201ENSMUST00000041318 3101 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Shox2P70390 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Shox2P70390 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC11.25□□□□□ -0.61
Shox2P70390 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Shox2P70390 Sirpa-204ENSMUST00000103203 3674 ntAPPRIS P3 TSL 5 BASIC11.25□□□□□ -0.61
Shox2P70390 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC11.25□□□□□ -0.61
Shox2P70390 Arhgap17-202ENSMUST00000106442 3336 ntAPPRIS P4 TSL 1 (best) BASIC11.25□□□□□ -0.61
Shox2P70390 AC171277.1-201ENSMUST00000216902 1441 ntBASIC11.25□□□□□ -0.61
Shox2P70390 Ccin-201ENSMUST00000095107 1941 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Shox2P70390 Hmbox1-201ENSMUST00000022544 3396 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Shox2P70390 Ptpn23-201ENSMUST00000040021 5346 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Shox2P70390 Cct8l1-201ENSMUST00000045016 1961 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Shox2P70390 Gdf2-201ENSMUST00000100720 2988 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Shox2P70390 Ctc1-202ENSMUST00000116359 3978 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Shox2P70390 St5-201ENSMUST00000077909 4612 ntAPPRIS P4 TSL 1 (best) BASIC11.24□□□□□ -0.61
Shox2P70390 6430548M08Rik-203ENSMUST00000108950 3125 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Shox2P70390 Traip-201ENSMUST00000049348 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Shox2P70390 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Shox2P70390 Slc16a7-202ENSMUST00000105257 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Shox2P70390 Zfp330-201ENSMUST00000034147 1675 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Shox2P70390 Zim1-203ENSMUST00000203908 1740 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Shox2P70390 Upk1b-201ENSMUST00000057767 1769 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Shox2P70390 AC155245.1-201ENSMUST00000222266 1804 ntBASIC11.24□□□□□ -0.61
Shox2P70390 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Shox2P70390 Nrros-204ENSMUST00000126869 2540 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Shox2P70390 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Shox2P70390 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Shox2P70390 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Shox2P70390 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Shox2P70390 Gm13297-201ENSMUST00000120205 934 ntBASIC11.24□□□□□ -0.61
Shox2P70390 Gm1335-201ENSMUST00000121653 386 ntBASIC11.24□□□□□ -0.61
Shox2P70390 Gm11424-201ENSMUST00000121929 829 ntBASIC11.24□□□□□ -0.61
Shox2P70390 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC11.24□□□□□ -0.61
Shox2P70390 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Shox2P70390 Gm13316-201ENSMUST00000140537 691 ntBASIC11.24□□□□□ -0.61
Shox2P70390 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Shox2P70390 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC11.24□□□□□ -0.61
Shox2P70390 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC11.24□□□□□ -0.61
Shox2P70390 Gm27441-201ENSMUST00000185000 105 ntBASIC11.24□□□□□ -0.61
Shox2P70390 Gm7067-201ENSMUST00000207698 1249 ntBASIC11.24□□□□□ -0.61
Shox2P70390 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC11.24□□□□□ -0.61
Shox2P70390 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC11.24□□□□□ -0.61
Shox2P70390 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Shox2P70390 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Shox2P70390 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Shox2P70390 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Shox2P70390 Stx1b-201ENSMUST00000106267 4536 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Shox2P70390 Dnmbp-206ENSMUST00000212592 3901 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Shox2P70390 Gm4366-201ENSMUST00000201488 1342 ntBASIC11.24□□□□□ -0.61
Shox2P70390 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Shox2P70390 Slc39a14-210ENSMUST00000152067 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Shox2P70390 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Shox2P70390 2210010C04Rik-201ENSMUST00000031931 2142 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Shox2P70390 Arhgap4-202ENSMUST00000114404 2895 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Shox2P70390 8030423F21Rik-201ENSMUST00000064097 2851 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Shox2P70390 Lhfpl2-201ENSMUST00000054274 4348 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Shox2P70390 Sipa1l2-202ENSMUST00000212168 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 61.8 ms