Protein–RNA interactions for Protein: P70196

Traf6, TNF receptor-associated factor 6, mousemouse

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf6P70196 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Traf6P70196 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Traf6P70196 Gm42141-201ENSMUST00000196534 2172 ntBASIC11.34□□□□□ -0.59
Traf6P70196 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC11.34□□□□□ -0.59
Traf6P70196 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Traf6P70196 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Traf6P70196 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Traf6P70196 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Traf6P70196 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Traf6P70196 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.59
Traf6P70196 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Traf6P70196 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Traf6P70196 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Traf6P70196 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC11.33□□□□□ -0.6
Traf6P70196 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Traf6P70196 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Traf6P70196 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Traf6P70196 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Traf6P70196 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Traf6P70196 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Traf6P70196 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Traf6P70196 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Traf6P70196 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC11.33□□□□□ -0.6
Traf6P70196 Gm22133-201ENSMUST00000102082 109 ntBASIC11.33□□□□□ -0.6
Traf6P70196 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC11.33□□□□□ -0.6
Traf6P70196 Prl8a2-202ENSMUST00000110363 922 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Traf6P70196 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC11.33□□□□□ -0.6
Traf6P70196 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC11.33□□□□□ -0.6
Traf6P70196 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC11.33□□□□□ -0.6
Traf6P70196 Prl8a2-201ENSMUST00000018403 939 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Traf6P70196 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC11.33□□□□□ -0.6
Traf6P70196 Gm38170-201ENSMUST00000195404 816 ntBASIC11.33□□□□□ -0.6
Traf6P70196 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC11.33□□□□□ -0.6
Traf6P70196 Gm17812-201ENSMUST00000204935 318 ntBASIC11.33□□□□□ -0.6
Traf6P70196 A930002H02Rik-201ENSMUST00000208672 1178 ntBASIC11.33□□□□□ -0.6
Traf6P70196 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC11.33□□□□□ -0.6
Traf6P70196 Gm45610-201ENSMUST00000209227 784 ntBASIC11.33□□□□□ -0.6
Traf6P70196 Gm8913-201ENSMUST00000209491 641 ntBASIC11.33□□□□□ -0.6
Traf6P70196 AC134869.4-202ENSMUST00000224350 837 ntBASIC11.33□□□□□ -0.6
Traf6P70196 CT025552.1-201ENSMUST00000224561 521 ntBASIC11.33□□□□□ -0.6
Traf6P70196 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Traf6P70196 Brd1-202ENSMUST00000109380 3259 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Traf6P70196 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Traf6P70196 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Traf6P70196 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Traf6P70196 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Traf6P70196 Gm13135-201ENSMUST00000117628 3121 ntBASIC11.33□□□□□ -0.6
Traf6P70196 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Traf6P70196 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Traf6P70196 Plekhn1-204ENSMUST00000218699 3196 ntTSL 2 BASIC11.32□□□□□ -0.6
Traf6P70196 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Traf6P70196 Ccdc57-201ENSMUST00000056781 3403 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Traf6P70196 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Traf6P70196 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC11.32□□□□□ -0.6
Traf6P70196 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Traf6P70196 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC11.32□□□□□ -0.6
Traf6P70196 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Traf6P70196 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Traf6P70196 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Traf6P70196 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Traf6P70196 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Traf6P70196 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Traf6P70196 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Traf6P70196 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Traf6P70196 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC11.32□□□□□ -0.6
Traf6P70196 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Traf6P70196 Gm649-201ENSMUST00000117284 1054 ntBASIC11.32□□□□□ -0.6
Traf6P70196 Gm13665-201ENSMUST00000120830 528 ntBASIC11.32□□□□□ -0.6
Traf6P70196 Gm11660-201ENSMUST00000120955 412 ntBASIC11.32□□□□□ -0.6
Traf6P70196 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC11.32□□□□□ -0.6
Traf6P70196 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Traf6P70196 Gm27227-201ENSMUST00000183413 633 ntTSL 3 BASIC11.32□□□□□ -0.6
Traf6P70196 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Traf6P70196 Olfr202-202ENSMUST00000201687 1232 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Traf6P70196 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC11.32□□□□□ -0.6
Traf6P70196 Gm17827-201ENSMUST00000211825 742 ntBASIC11.32□□□□□ -0.6
Traf6P70196 Aprt-ps-201ENSMUST00000212311 505 ntBASIC11.32□□□□□ -0.6
Traf6P70196 AC159747.1-201ENSMUST00000219903 265 ntBASIC11.32□□□□□ -0.6
Traf6P70196 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC11.32□□□□□ -0.6
Traf6P70196 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Traf6P70196 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Traf6P70196 Gm37160-201ENSMUST00000193081 1689 ntBASIC11.32□□□□□ -0.6
Traf6P70196 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Traf6P70196 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Traf6P70196 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Traf6P70196 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Traf6P70196 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Traf6P70196 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Traf6P70196 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Traf6P70196 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Traf6P70196 Crot-201ENSMUST00000003720 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Traf6P70196 Slc2a10-201ENSMUST00000029196 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Traf6P70196 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Traf6P70196 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Traf6P70196 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Traf6P70196 Flad1-204ENSMUST00000129308 2892 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Traf6P70196 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Traf6P70196 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Traf6P70196 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Traf6P70196 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms