Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Six5P70178 Gm43221-201ENSMUST00000197612 2071 ntBASIC10.72□□□□□ -0.69
Six5P70178 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Six5P70178 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Six5P70178 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Six5P70178 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC10.72□□□□□ -0.69
Six5P70178 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Six5P70178 Gm15352-201ENSMUST00000118696 270 ntBASIC10.72□□□□□ -0.69
Six5P70178 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC10.72□□□□□ -0.69
Six5P70178 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC10.72□□□□□ -0.69
Six5P70178 Gm16570-201ENSMUST00000161951 436 ntBASIC10.72□□□□□ -0.69
Six5P70178 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Six5P70178 Mir5120-201ENSMUST00000175020 78 ntBASIC10.72□□□□□ -0.69
Six5P70178 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Six5P70178 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Six5P70178 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Six5P70178 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC10.72□□□□□ -0.69
Six5P70178 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC10.72□□□□□ -0.69
Six5P70178 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC10.72□□□□□ -0.69
Six5P70178 Gm37246-201ENSMUST00000192665 835 ntBASIC10.72□□□□□ -0.69
Six5P70178 Gm43852-201ENSMUST00000202098 917 ntBASIC10.72□□□□□ -0.69
Six5P70178 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Six5P70178 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Six5P70178 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Six5P70178 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Six5P70178 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Six5P70178 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Six5P70178 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Six5P70178 Dock6-207ENSMUST00000217336 6880 ntAPPRIS P2 TSL 5 BASIC10.72□□□□□ -0.69
Six5P70178 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Six5P70178 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Six5P70178 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Six5P70178 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC10.72□□□□□ -0.69
Six5P70178 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Six5P70178 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Six5P70178 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Six5P70178 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Six5P70178 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Six5P70178 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Six5P70178 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Six5P70178 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Six5P70178 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Six5P70178 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Six5P70178 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Six5P70178 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Six5P70178 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC10.72□□□□□ -0.69
Six5P70178 Anks1b-218ENSMUST00000182595 3715 ntTSL 5 BASIC10.72□□□□□ -0.69
Six5P70178 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC10.72□□□□□ -0.69
Six5P70178 Gm5380-201ENSMUST00000119296 2136 ntBASIC10.72□□□□□ -0.69
Six5P70178 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Six5P70178 AC126257.2-201ENSMUST00000215507 2300 ntBASIC10.72□□□□□ -0.69
Six5P70178 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Six5P70178 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Six5P70178 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Six5P70178 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Six5P70178 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Six5P70178 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC10.71□□□□□ -0.69
Six5P70178 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Six5P70178 Manea-201ENSMUST00000041374 4867 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Six5P70178 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC10.71□□□□□ -0.69
Six5P70178 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Six5P70178 Gm12165-201ENSMUST00000117047 342 ntBASIC10.71□□□□□ -0.69
Six5P70178 Gm6335-201ENSMUST00000118081 1194 ntBASIC10.71□□□□□ -0.69
Six5P70178 Gm7816-201ENSMUST00000119884 1194 ntBASIC10.71□□□□□ -0.69
Six5P70178 Gm15542-201ENSMUST00000121585 1194 ntBASIC10.71□□□□□ -0.69
Six5P70178 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC10.71□□□□□ -0.69
Six5P70178 Gm45234-201ENSMUST00000129411 4359 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.69
Six5P70178 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC10.71□□□□□ -0.69
Six5P70178 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC10.71□□□□□ -0.69
Six5P70178 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Six5P70178 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC10.71□□□□□ -0.69
Six5P70178 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC10.71□□□□□ -0.69
Six5P70178 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Six5P70178 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Six5P70178 Gm19353-201ENSMUST00000184561 445 ntBASIC10.71□□□□□ -0.69
Six5P70178 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC10.71□□□□□ -0.69
Six5P70178 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC10.71□□□□□ -0.69
Six5P70178 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC10.71□□□□□ -0.69
Six5P70178 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC10.71□□□□□ -0.69
Six5P70178 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC10.71□□□□□ -0.69
Six5P70178 Gm37466-201ENSMUST00000195692 652 ntBASIC10.71□□□□□ -0.69
Six5P70178 Gm45856-201ENSMUST00000212752 416 ntBASIC10.71□□□□□ -0.69
Six5P70178 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Six5P70178 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC10.71□□□□□ -0.69
Six5P70178 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Six5P70178 CT009489.1-201ENSMUST00000227740 1893 ntBASIC10.71□□□□□ -0.69
Six5P70178 Ly75-201ENSMUST00000028362 5172 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Six5P70178 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Six5P70178 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Six5P70178 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Six5P70178 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Six5P70178 Hoxa1-201ENSMUST00000000964 2251 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Six5P70178 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Six5P70178 Tiam1-204ENSMUST00000114124 7406 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.7
Six5P70178 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC10.71□□□□□ -0.7
Six5P70178 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Six5P70178 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Six5P70178 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC10.71□□□□□ -0.7
Six5P70178 Gm13135-201ENSMUST00000117628 3121 ntBASIC10.71□□□□□ -0.7
Six5P70178 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms