Protein–RNA interactions for Protein: P68404

Prkcb, Protein kinase C beta type, mousemouse

Predictions only

Length 671 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkcbP68404 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
PrkcbP68404 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
PrkcbP68404 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
PrkcbP68404 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
PrkcbP68404 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
PrkcbP68404 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
PrkcbP68404 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
PrkcbP68404 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
PrkcbP68404 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
PrkcbP68404 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
PrkcbP68404 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC12.36□□□□□ -0.43
PrkcbP68404 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
PrkcbP68404 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC12.36□□□□□ -0.43
PrkcbP68404 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
PrkcbP68404 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC12.36□□□□□ -0.43
PrkcbP68404 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
PrkcbP68404 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
PrkcbP68404 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
PrkcbP68404 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
PrkcbP68404 Gm24398-201ENSMUST00000157870 109 ntBASIC12.36□□□□□ -0.43
PrkcbP68404 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
PrkcbP68404 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
PrkcbP68404 Gm45219-201ENSMUST00000205602 465 ntBASIC12.36□□□□□ -0.43
PrkcbP68404 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC12.36□□□□□ -0.43
PrkcbP68404 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
PrkcbP68404 CT010506.1-201ENSMUST00000223673 349 ntBASIC12.36□□□□□ -0.43
PrkcbP68404 CT025602.2-201ENSMUST00000226553 772 ntBASIC12.36□□□□□ -0.43
PrkcbP68404 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
PrkcbP68404 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
PrkcbP68404 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
PrkcbP68404 Gm10254-201ENSMUST00000052888 867 ntBASIC12.36□□□□□ -0.43
PrkcbP68404 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
PrkcbP68404 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
PrkcbP68404 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
PrkcbP68404 Rab3c-202ENSMUST00000223922 2398 ntBASIC12.36□□□□□ -0.43
PrkcbP68404 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC12.36□□□□□ -0.43
PrkcbP68404 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
PrkcbP68404 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
PrkcbP68404 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
PrkcbP68404 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
PrkcbP68404 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
PrkcbP68404 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC12.36□□□□□ -0.43
PrkcbP68404 Gm9415-201ENSMUST00000200462 1321 ntBASIC12.36□□□□□ -0.43
PrkcbP68404 Gm8899-201ENSMUST00000214635 1332 ntBASIC12.36□□□□□ -0.43
PrkcbP68404 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
PrkcbP68404 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
PrkcbP68404 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
PrkcbP68404 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
PrkcbP68404 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
PrkcbP68404 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
PrkcbP68404 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
PrkcbP68404 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC12.35□□□□□ -0.43
PrkcbP68404 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC12.35□□□□□ -0.43
PrkcbP68404 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC12.35□□□□□ -0.43
PrkcbP68404 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
PrkcbP68404 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
PrkcbP68404 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
PrkcbP68404 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
PrkcbP68404 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
PrkcbP68404 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
PrkcbP68404 Gm15528-201ENSMUST00000117821 864 ntBASIC12.35□□□□□ -0.43
PrkcbP68404 Gm14740-201ENSMUST00000118538 1150 ntBASIC12.35□□□□□ -0.43
PrkcbP68404 Gm15617-201ENSMUST00000118973 771 ntBASIC12.35□□□□□ -0.43
PrkcbP68404 n-R5s84-201ENSMUST00000122591 109 ntBASIC12.35□□□□□ -0.43
PrkcbP68404 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
PrkcbP68404 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
PrkcbP68404 Mir1956-201ENSMUST00000157748 65 ntBASIC12.35□□□□□ -0.43
PrkcbP68404 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
PrkcbP68404 Gm5778-201ENSMUST00000171003 1072 ntBASIC12.35□□□□□ -0.43
PrkcbP68404 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC12.35□□□□□ -0.43
PrkcbP68404 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
PrkcbP68404 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC12.35□□□□□ -0.43
PrkcbP68404 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC12.35□□□□□ -0.43
PrkcbP68404 AC140293.1-201ENSMUST00000225626 1247 ntBASIC12.35□□□□□ -0.43
PrkcbP68404 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
PrkcbP68404 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
PrkcbP68404 Gm10263-201ENSMUST00000085163 300 ntBASIC12.35□□□□□ -0.43
PrkcbP68404 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
PrkcbP68404 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC12.35□□□□□ -0.43
PrkcbP68404 Gm9544-201ENSMUST00000223349 2482 ntBASIC12.35□□□□□ -0.43
PrkcbP68404 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
PrkcbP68404 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
PrkcbP68404 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
PrkcbP68404 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
PrkcbP68404 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC12.35□□□□□ -0.43
PrkcbP68404 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
PrkcbP68404 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
PrkcbP68404 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
PrkcbP68404 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
PrkcbP68404 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
PrkcbP68404 Gm43102-201ENSMUST00000201004 2324 ntBASIC12.34□□□□□ -0.43
PrkcbP68404 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
PrkcbP68404 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
PrkcbP68404 Gm37542-201ENSMUST00000192563 2832 ntBASIC12.34□□□□□ -0.43
PrkcbP68404 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
PrkcbP68404 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
PrkcbP68404 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
PrkcbP68404 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC12.34□□□□□ -0.43
PrkcbP68404 Gm45416-201ENSMUST00000209713 2201 ntBASIC12.34□□□□□ -0.43
PrkcbP68404 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms