Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Gm10807-201ENSMUST00000177134 795 ntBASIC12.64□□□□□ -0.39
Hmgb1P63158 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Hmgb1P63158 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Hmgb1P63158 Gm5714-201ENSMUST00000197343 566 ntBASIC12.64□□□□□ -0.39
Hmgb1P63158 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Hmgb1P63158 Gm44008-201ENSMUST00000204345 412 ntBASIC12.64□□□□□ -0.39
Hmgb1P63158 Gm45331-201ENSMUST00000209868 554 ntBASIC12.64□□□□□ -0.39
Hmgb1P63158 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC12.64□□□□□ -0.39
Hmgb1P63158 Gm6082-201ENSMUST00000215204 454 ntBASIC12.64□□□□□ -0.39
Hmgb1P63158 Gm7441-201ENSMUST00000220697 1074 ntBASIC12.64□□□□□ -0.39
Hmgb1P63158 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hmgb1P63158 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hmgb1P63158 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Hmgb1P63158 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hmgb1P63158 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Hmgb1P63158 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hmgb1P63158 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hmgb1P63158 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hmgb1P63158 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hmgb1P63158 Gm10603-201ENSMUST00000183512 2279 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Hmgb1P63158 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hmgb1P63158 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hmgb1P63158 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Hmgb1P63158 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC12.64□□□□□ -0.39
Hmgb1P63158 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hmgb1P63158 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Hmgb1P63158 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Hmgb1P63158 Gm9129-201ENSMUST00000218173 1689 ntBASIC12.64□□□□□ -0.39
Hmgb1P63158 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hmgb1P63158 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hmgb1P63158 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hmgb1P63158 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Hmgb1P63158 Crry-ps-201ENSMUST00000079090 1309 ntBASIC12.63□□□□□ -0.39
Hmgb1P63158 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hmgb1P63158 Sp3-201ENSMUST00000066003 3808 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Hmgb1P63158 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Hmgb1P63158 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hmgb1P63158 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC12.63□□□□□ -0.39
Hmgb1P63158 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Hmgb1P63158 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC12.63□□□□□ -0.39
Hmgb1P63158 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hmgb1P63158 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Hmgb1P63158 Gm19178-201ENSMUST00000217524 1819 ntBASIC12.63□□□□□ -0.39
Hmgb1P63158 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hmgb1P63158 Gimap8-202ENSMUST00000203083 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hmgb1P63158 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC12.63□□□□□ -0.39
Hmgb1P63158 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hmgb1P63158 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hmgb1P63158 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hmgb1P63158 Gm12380-201ENSMUST00000119012 544 ntBASIC12.63□□□□□ -0.39
Hmgb1P63158 Gm8566-201ENSMUST00000120174 465 ntBASIC12.63□□□□□ -0.39
Hmgb1P63158 Gm13350-201ENSMUST00000120519 479 ntBASIC12.63□□□□□ -0.39
Hmgb1P63158 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Hmgb1P63158 Gm24749-201ENSMUST00000157838 343 ntBASIC12.63□□□□□ -0.39
Hmgb1P63158 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hmgb1P63158 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hmgb1P63158 Gm16505-201ENSMUST00000179981 232 ntBASIC12.63□□□□□ -0.39
Hmgb1P63158 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Hmgb1P63158 Gm28941-201ENSMUST00000185536 1017 ntBASIC12.63□□□□□ -0.39
Hmgb1P63158 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Hmgb1P63158 Ighv1-62-201ENSMUST00000193406 350 ntBASIC12.63□□□□□ -0.39
Hmgb1P63158 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC12.63□□□□□ -0.39
Hmgb1P63158 Gm9678-201ENSMUST00000198979 1149 ntBASIC12.63□□□□□ -0.39
Hmgb1P63158 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC12.63□□□□□ -0.39
Hmgb1P63158 Gm44262-201ENSMUST00000204969 372 ntBASIC12.63□□□□□ -0.39
Hmgb1P63158 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC12.63□□□□□ -0.39
Hmgb1P63158 Gm45113-201ENSMUST00000207518 165 ntBASIC12.63□□□□□ -0.39
Hmgb1P63158 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Hmgb1P63158 AC160929.1-201ENSMUST00000221247 415 ntBASIC12.63□□□□□ -0.39
Hmgb1P63158 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Hmgb1P63158 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hmgb1P63158 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Hmgb1P63158 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hmgb1P63158 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Hmgb1P63158 A730018C14Rik-201ENSMUST00000050754 2253 ntTSL 2 BASIC12.63□□□□□ -0.39
Hmgb1P63158 Gm21939-201ENSMUST00000221137 2773 ntBASIC12.63□□□□□ -0.39
Hmgb1P63158 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hmgb1P63158 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hmgb1P63158 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hmgb1P63158 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hmgb1P63158 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hmgb1P63158 Gm36940-201ENSMUST00000194281 2036 ntBASIC12.62□□□□□ -0.39
Hmgb1P63158 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hmgb1P63158 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC12.62□□□□□ -0.39
Hmgb1P63158 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hmgb1P63158 Cpne9-201ENSMUST00000041203 2777 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Hmgb1P63158 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hmgb1P63158 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Hmgb1P63158 Adgrv1-214ENSMUST00000224088 1492 ntBASIC12.62□□□□□ -0.39
Hmgb1P63158 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hmgb1P63158 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hmgb1P63158 Gm12463-201ENSMUST00000118271 849 ntBASIC12.62□□□□□ -0.39
Hmgb1P63158 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC12.62□□□□□ -0.39
Hmgb1P63158 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC12.62□□□□□ -0.39
Hmgb1P63158 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Hmgb1P63158 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Hmgb1P63158 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Hmgb1P63158 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Hmgb1P63158 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC12.62□□□□□ -0.39
Hmgb1P63158 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms