Protein–RNA interactions for Protein: P62322

Lsm5, U6 snRNA-associated Sm-like protein LSm5, mousemouse

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm5P62322 Gnas-223ENSMUST00000185956 3729 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Lsm5P62322 Gnas-224ENSMUST00000186907 3729 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Lsm5P62322 Gp2-201ENSMUST00000033255 1993 ntAPPRIS P2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Lsm5P62322 Gm8752-201ENSMUST00000173427 1694 ntBASIC9.48□□□□□ -0.89
Lsm5P62322 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC9.48□□□□□ -0.89
Lsm5P62322 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC9.48□□□□□ -0.89
Lsm5P62322 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Lsm5P62322 Ptp4a3-203ENSMUST00000165541 3539 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
Lsm5P62322 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Lsm5P62322 Gm16576-201ENSMUST00000128342 5404 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Lsm5P62322 BC049352-203ENSMUST00000171799 1714 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Lsm5P62322 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Lsm5P62322 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Lsm5P62322 Nf2-202ENSMUST00000056290 2394 ntAPPRIS ALT1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Lsm5P62322 Ptpn21-202ENSMUST00000170188 5562 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Lsm5P62322 Tmem33-201ENSMUST00000037918 6247 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
Lsm5P62322 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC9.47□□□□□ -0.89
Lsm5P62322 Csnk1g1-214ENSMUST00000206594 2482 ntAPPRIS P2 TSL 5 BASIC9.47□□□□□ -0.89
Lsm5P62322 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Lsm5P62322 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Lsm5P62322 Abcg1-201ENSMUST00000024829 3610 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Lsm5P62322 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Lsm5P62322 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Lsm5P62322 Zzef1-207ENSMUST00000172220 11249 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
Lsm5P62322 Asxl2-207ENSMUST00000153102 4462 ntAPPRIS P2 TSL 5 BASIC9.47□□□□□ -0.89
Lsm5P62322 Zdhhc21-201ENSMUST00000030110 8763 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Lsm5P62322 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Lsm5P62322 Smok3a-201ENSMUST00000085886 2723 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Lsm5P62322 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Lsm5P62322 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Lsm5P62322 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Lsm5P62322 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Lsm5P62322 Gm12463-201ENSMUST00000118271 849 ntBASIC9.47□□□□□ -0.89
Lsm5P62322 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC9.47□□□□□ -0.89
Lsm5P62322 Gm12960-201ENSMUST00000120017 1066 ntBASIC9.47□□□□□ -0.89
Lsm5P62322 Dhx34-207ENSMUST00000163968 3801 ntAPPRIS P2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Lsm5P62322 Gm6222-202ENSMUST00000182143 629 ntBASIC9.47□□□□□ -0.89
Lsm5P62322 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Lsm5P62322 Gm27839-201ENSMUST00000184242 106 ntBASIC9.47□□□□□ -0.89
Lsm5P62322 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Lsm5P62322 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC9.47□□□□□ -0.89
Lsm5P62322 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Lsm5P62322 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC9.47□□□□□ -0.89
Lsm5P62322 Gm43966-201ENSMUST00000203301 612 ntBASIC9.47□□□□□ -0.89
Lsm5P62322 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC9.47□□□□□ -0.89
Lsm5P62322 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Lsm5P62322 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC9.47□□□□□ -0.89
Lsm5P62322 Gm4935-201ENSMUST00000221316 1198 ntBASIC9.47□□□□□ -0.89
Lsm5P62322 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC9.47□□□□□ -0.89
Lsm5P62322 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Lsm5P62322 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC9.47□□□□□ -0.89
Lsm5P62322 n-R5s195-201ENSMUST00000082891 119 ntBASIC9.47□□□□□ -0.89
Lsm5P62322 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
Lsm5P62322 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
Lsm5P62322 Gm6091-201ENSMUST00000098307 165 ntBASIC9.47□□□□□ -0.89
Lsm5P62322 Cd300lg-201ENSMUST00000017453 2353 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
Lsm5P62322 Cycs-202ENSMUST00000161401 3123 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Lsm5P62322 Sik2-206ENSMUST00000176824 5369 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
Lsm5P62322 Maob-201ENSMUST00000040820 2411 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Lsm5P62322 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Lsm5P62322 Hk3-201ENSMUST00000052949 3219 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Lsm5P62322 Eif2ak4-201ENSMUST00000005233 5212 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Lsm5P62322 Adamts9-205ENSMUST00000167391 6033 ntTSL 5 BASIC9.47□□□□□ -0.89
Lsm5P62322 Wdr60-201ENSMUST00000039349 3721 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Lsm5P62322 Apol7a-203ENSMUST00000175919 2263 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Lsm5P62322 Ly75-201ENSMUST00000028362 5172 ntAPPRIS P2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Lsm5P62322 Rpe65-202ENSMUST00000196999 1863 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Lsm5P62322 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
Lsm5P62322 A930016O22Rik-202ENSMUST00000208685 2349 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Lsm5P62322 Atxn1l-202ENSMUST00000212605 7439 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Lsm5P62322 Bsnd-201ENSMUST00000054472 2756 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Lsm5P62322 Calu-201ENSMUST00000031779 3229 ntAPPRIS P5 TSL 1 (best) BASIC9.46□□□□□ -0.89
Lsm5P62322 Plec-206ENSMUST00000074834 14855 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.89
Lsm5P62322 Cdk5rap1-201ENSMUST00000028990 1970 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Lsm5P62322 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Lsm5P62322 Pa2g4-202ENSMUST00000131728 2483 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Lsm5P62322 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.89
Lsm5P62322 Nphs1-203ENSMUST00000126297 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.89
Lsm5P62322 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.89
Lsm5P62322 Gtf3c6-206ENSMUST00000217537 2526 ntAPPRIS P2 TSL 1 (best) BASIC9.46□□□□□ -0.89
Lsm5P62322 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Lsm5P62322 Gm38271-201ENSMUST00000192296 1603 ntBASIC9.46□□□□□ -0.89
Lsm5P62322 Zfp804b-202ENSMUST00000200317 4430 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.89
Lsm5P62322 Eif4g2-206ENSMUST00000161051 3548 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Lsm5P62322 Tasp1-202ENSMUST00000099304 2127 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Lsm5P62322 Sorbs3-203ENSMUST00000227653 3061 ntAPPRIS ALT2 BASIC9.46□□□□□ -0.89
Lsm5P62322 Abcc3-201ENSMUST00000021231 4999 ntAPPRIS P2 TSL 1 (best) BASIC9.46□□□□□ -0.89
Lsm5P62322 Rps6ka6-204ENSMUST00000113428 4135 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.89
Lsm5P62322 Sap18-204ENSMUST00000128764 5125 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Lsm5P62322 Bloc1s5-201ENSMUST00000035899 5634 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Lsm5P62322 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.89
Lsm5P62322 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.89
Lsm5P62322 Azin1-203ENSMUST00000110329 4217 ntAPPRIS P1 TSL 2 BASIC9.46□□□□□ -0.89
Lsm5P62322 Prdm10-204ENSMUST00000215499 6772 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.89
Lsm5P62322 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC9.46□□□□□ -0.9
Lsm5P62322 Gm45161-201ENSMUST00000207316 2263 ntBASIC9.46□□□□□ -0.9
Lsm5P62322 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC9.46□□□□□ -0.9
Lsm5P62322 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC9.46□□□□□ -0.9
Lsm5P62322 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC9.46□□□□□ -0.9
Lsm5P62322 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC9.46□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms