Protein–RNA interactions for Protein: P56183

Rrp1, Ribosomal RNA processing protein 1 homolog A, mousemouse

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1P56183 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rrp1P56183 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rrp1P56183 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rrp1P56183 Gm10782-202ENSMUST00000223775 1480 ntBASIC12.89□□□□□ -0.35
Rrp1P56183 Angel1-201ENSMUST00000021682 3850 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rrp1P56183 Mdh1-201ENSMUST00000102874 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rrp1P56183 Gm10699-201ENSMUST00000098916 2130 ntBASIC12.89□□□□□ -0.35
Rrp1P56183 Eif4g2-206ENSMUST00000161051 3548 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Rrp1P56183 Epha7-204ENSMUST00000108194 2323 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Rrp1P56183 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rrp1P56183 Bbs2-201ENSMUST00000034206 3064 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rrp1P56183 Mx2-201ENSMUST00000024112 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rrp1P56183 Atxn7l1-204ENSMUST00000125192 2644 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Rrp1P56183 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rrp1P56183 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rrp1P56183 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
Rrp1P56183 Rsrc2-202ENSMUST00000057795 2270 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Rrp1P56183 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rrp1P56183 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rrp1P56183 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rrp1P56183 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC12.88□□□□□ -0.35
Rrp1P56183 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Rrp1P56183 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Rrp1P56183 Slc13a5-202ENSMUST00000137701 1746 ntTSL 5 BASIC12.88□□□□□ -0.35
Rrp1P56183 Gm22323-201ENSMUST00000103832 109 ntBASIC12.88□□□□□ -0.35
Rrp1P56183 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Rrp1P56183 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Rrp1P56183 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rrp1P56183 Gm15808-201ENSMUST00000119046 604 ntBASIC12.88□□□□□ -0.35
Rrp1P56183 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC12.88□□□□□ -0.35
Rrp1P56183 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC12.88□□□□□ -0.35
Rrp1P56183 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rrp1P56183 Gm25700-201ENSMUST00000177693 110 ntBASIC12.88□□□□□ -0.35
Rrp1P56183 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Rrp1P56183 Gm38317-201ENSMUST00000195564 343 ntBASIC12.88□□□□□ -0.35
Rrp1P56183 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Rrp1P56183 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC12.88□□□□□ -0.35
Rrp1P56183 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rrp1P56183 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Rrp1P56183 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rrp1P56183 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rrp1P56183 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC12.88□□□□□ -0.35
Rrp1P56183 Gm10436-202ENSMUST00000220521 1788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rrp1P56183 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Rrp1P56183 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rrp1P56183 Alms1-ps2-202ENSMUST00000161983 2290 ntBASIC12.88□□□□□ -0.35
Rrp1P56183 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC12.88□□□□□ -0.35
Rrp1P56183 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rrp1P56183 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Rrp1P56183 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC12.88□□□□□ -0.35
Rrp1P56183 Ccdc129-201ENSMUST00000044729 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rrp1P56183 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Rrp1P56183 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rrp1P56183 Zcwpw1-201ENSMUST00000035852 2222 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rrp1P56183 Anxa11-202ENSMUST00000112364 1625 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Rrp1P56183 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Rrp1P56183 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Rrp1P56183 Vstm2a-201ENSMUST00000109645 3264 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rrp1P56183 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rrp1P56183 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC12.87□□□□□ -0.35
Rrp1P56183 4930432K21Rik-202ENSMUST00000118856 2366 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rrp1P56183 Dcst2-201ENSMUST00000208216 2285 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Rrp1P56183 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rrp1P56183 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Rrp1P56183 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Rrp1P56183 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rrp1P56183 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Rrp1P56183 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rrp1P56183 Cep112-213ENSMUST00000150863 3453 ntTSL 5 BASIC12.87□□□□□ -0.35
Rrp1P56183 Gm10646-201ENSMUST00000213227 3293 ntTSL 2 BASIC12.87□□□□□ -0.35
Rrp1P56183 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rrp1P56183 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Rrp1P56183 Gm12715-201ENSMUST00000121430 1128 ntBASIC12.87□□□□□ -0.35
Rrp1P56183 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC12.87□□□□□ -0.35
Rrp1P56183 Gm15276-201ENSMUST00000145953 498 ntBASIC12.87□□□□□ -0.35
Rrp1P56183 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rrp1P56183 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC12.87□□□□□ -0.35
Rrp1P56183 Gm4857-201ENSMUST00000192718 785 ntBASIC12.87□□□□□ -0.35
Rrp1P56183 Gm17812-201ENSMUST00000204935 318 ntBASIC12.87□□□□□ -0.35
Rrp1P56183 Gm13097-201ENSMUST00000210722 397 ntBASIC12.87□□□□□ -0.35
Rrp1P56183 AC122891.1-201ENSMUST00000218671 268 ntBASIC12.87□□□□□ -0.35
Rrp1P56183 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Rrp1P56183 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rrp1P56183 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC12.87□□□□□ -0.35
Rrp1P56183 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rrp1P56183 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC12.87□□□□□ -0.35
Rrp1P56183 Gm26868-201ENSMUST00000181927 2655 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Rrp1P56183 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Rrp1P56183 Gm42141-201ENSMUST00000196534 2172 ntBASIC12.87□□□□□ -0.35
Rrp1P56183 Tctn3-201ENSMUST00000025981 2743 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rrp1P56183 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Rrp1P56183 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rrp1P56183 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Rrp1P56183 Mx2-202ENSMUST00000188251 2421 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Rrp1P56183 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Rrp1P56183 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Rrp1P56183 Gm26684-202ENSMUST00000228229 8257 ntBASIC12.87□□□□□ -0.35
Rrp1P56183 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC12.87□□□□□ -0.35
Rrp1P56183 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rrp1P56183 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms