Protein–RNA interactions for Protein: P54846

Nrl, Neural retina-specific leucine zipper protein, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NrlP54846 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
NrlP54846 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
NrlP54846 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
NrlP54846 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
NrlP54846 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
NrlP54846 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NrlP54846 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NrlP54846 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
NrlP54846 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
NrlP54846 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NrlP54846 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NrlP54846 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
NrlP54846 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
NrlP54846 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
NrlP54846 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NrlP54846 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
NrlP54846 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
NrlP54846 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC12.19□□□□□ -0.46
NrlP54846 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
NrlP54846 Gm43727-201ENSMUST00000198021 2647 ntBASIC12.19□□□□□ -0.46
NrlP54846 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NrlP54846 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC12.19□□□□□ -0.46
NrlP54846 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NrlP54846 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
NrlP54846 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NrlP54846 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NrlP54846 Trav13d-1-201ENSMUST00000103588 396 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
NrlP54846 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC12.19□□□□□ -0.46
NrlP54846 Uqcc1-202ENSMUST00000109631 1091 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
NrlP54846 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC12.19□□□□□ -0.46
NrlP54846 Gm13422-201ENSMUST00000118834 504 ntBASIC12.19□□□□□ -0.46
NrlP54846 Gm12783-201ENSMUST00000121425 397 ntBASIC12.19□□□□□ -0.46
NrlP54846 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
NrlP54846 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
NrlP54846 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC12.19□□□□□ -0.46
NrlP54846 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC12.19□□□□□ -0.46
NrlP54846 Gm9884-201ENSMUST00000194343 1222 ntBASIC12.19□□□□□ -0.46
NrlP54846 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC12.19□□□□□ -0.46
NrlP54846 Gm43380-201ENSMUST00000200421 220 ntBASIC12.19□□□□□ -0.46
NrlP54846 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC12.19□□□□□ -0.46
NrlP54846 Gm17825-201ENSMUST00000206836 794 ntBASIC12.19□□□□□ -0.46
NrlP54846 Gm18463-201ENSMUST00000207258 474 ntBASIC12.19□□□□□ -0.46
NrlP54846 Gm5996-201ENSMUST00000211110 718 ntBASIC12.19□□□□□ -0.46
NrlP54846 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC12.19□□□□□ -0.46
NrlP54846 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC12.19□□□□□ -0.46
NrlP54846 AC168279.1-201ENSMUST00000214611 382 ntBASIC12.19□□□□□ -0.46
NrlP54846 CT010506.1-201ENSMUST00000223673 349 ntBASIC12.19□□□□□ -0.46
NrlP54846 Gm16380-201ENSMUST00000077997 478 ntBASIC12.19□□□□□ -0.46
NrlP54846 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
NrlP54846 n-R5s185-201ENSMUST00000083953 119 ntBASIC12.19□□□□□ -0.46
NrlP54846 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NrlP54846 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
NrlP54846 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
NrlP54846 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
NrlP54846 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NrlP54846 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NrlP54846 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NrlP54846 Gm42913-201ENSMUST00000197936 1853 ntBASIC12.19□□□□□ -0.46
NrlP54846 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC12.19□□□□□ -0.46
NrlP54846 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
NrlP54846 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC12.18□□□□□ -0.46
NrlP54846 AC158636.1-201ENSMUST00000220118 1393 ntBASIC12.18□□□□□ -0.46
NrlP54846 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NrlP54846 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NrlP54846 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
NrlP54846 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
NrlP54846 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
NrlP54846 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NrlP54846 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
NrlP54846 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
NrlP54846 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NrlP54846 Cfap161-201ENSMUST00000011298 1335 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
NrlP54846 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
NrlP54846 Gm18986-201ENSMUST00000216029 1986 ntBASIC12.18□□□□□ -0.46
NrlP54846 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
NrlP54846 AC130823.1-201ENSMUST00000228929 1549 ntBASIC12.18□□□□□ -0.46
NrlP54846 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NrlP54846 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
NrlP54846 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
NrlP54846 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
NrlP54846 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
NrlP54846 Rhox3c-202ENSMUST00000115189 648 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
NrlP54846 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
NrlP54846 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
NrlP54846 Gm22379-201ENSMUST00000157480 131 ntBASIC12.18□□□□□ -0.46
NrlP54846 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC12.18□□□□□ -0.46
NrlP54846 Gm4862-201ENSMUST00000170405 438 ntBASIC12.18□□□□□ -0.46
NrlP54846 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC12.18□□□□□ -0.46
NrlP54846 Gm21844-201ENSMUST00000178699 663 ntTSL 3 BASIC12.18□□□□□ -0.46
NrlP54846 Rhox3a2-204ENSMUST00000184565 823 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
NrlP54846 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC12.18□□□□□ -0.46
NrlP54846 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
NrlP54846 Gm29083-201ENSMUST00000189205 733 ntTSL 3 BASIC12.18□□□□□ -0.46
NrlP54846 Gm43163-201ENSMUST00000196571 442 ntBASIC12.18□□□□□ -0.46
NrlP54846 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC12.18□□□□□ -0.46
NrlP54846 AC154572.1-201ENSMUST00000226098 1204 ntBASIC12.18□□□□□ -0.46
NrlP54846 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
NrlP54846 Rhox3e-201ENSMUST00000081327 648 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
NrlP54846 Rhox3a2-201ENSMUST00000096459 828 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NrlP54846 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms