Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Msh6P54276 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Msh6P54276 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Msh6P54276 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC14.43□□□□□ -0.1
Msh6P54276 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Msh6P54276 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Msh6P54276 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Msh6P54276 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Msh6P54276 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Msh6P54276 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Msh6P54276 Trav11-201ENSMUST00000103585 343 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Msh6P54276 Trav11d-201ENSMUST00000103648 342 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Msh6P54276 Gng12-205ENSMUST00000114226 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Msh6P54276 Gm14165-201ENSMUST00000121456 952 ntBASIC14.43□□□□□ -0.1
Msh6P54276 Gstt3-203ENSMUST00000173537 687 ntTSL 3 BASIC14.43□□□□□ -0.1
Msh6P54276 Gm23400-201ENSMUST00000174994 102 ntBASIC14.43□□□□□ -0.1
Msh6P54276 Gm26463-201ENSMUST00000175065 101 ntBASIC14.43□□□□□ -0.1
Msh6P54276 Gm24332-201ENSMUST00000175102 102 ntBASIC14.43□□□□□ -0.1
Msh6P54276 Gm25959-201ENSMUST00000175112 102 ntBASIC14.43□□□□□ -0.1
Msh6P54276 Gm22475-201ENSMUST00000175169 102 ntBASIC14.43□□□□□ -0.1
Msh6P54276 Gm22903-201ENSMUST00000175193 102 ntBASIC14.43□□□□□ -0.1
Msh6P54276 Gm25070-201ENSMUST00000175237 102 ntBASIC14.43□□□□□ -0.1
Msh6P54276 Gm24159-201ENSMUST00000175264 102 ntBASIC14.43□□□□□ -0.1
Msh6P54276 Gm25299-201ENSMUST00000175283 102 ntBASIC14.43□□□□□ -0.1
Msh6P54276 Gm23798-201ENSMUST00000175560 102 ntBASIC14.43□□□□□ -0.1
Msh6P54276 Gm23802-201ENSMUST00000175565 102 ntBASIC14.43□□□□□ -0.1
Msh6P54276 Gm25708-201ENSMUST00000177687 102 ntBASIC14.43□□□□□ -0.1
Msh6P54276 Gm24370-201ENSMUST00000178007 102 ntBASIC14.43□□□□□ -0.1
Msh6P54276 Gm23049-201ENSMUST00000178068 102 ntBASIC14.43□□□□□ -0.1
Msh6P54276 Gm28019-201ENSMUST00000178138 101 ntBASIC14.43□□□□□ -0.1
Msh6P54276 Gm25571-201ENSMUST00000178322 102 ntBASIC14.43□□□□□ -0.1
Msh6P54276 Gm25355-201ENSMUST00000178456 101 ntBASIC14.43□□□□□ -0.1
Msh6P54276 Gm24975-201ENSMUST00000178492 101 ntBASIC14.43□□□□□ -0.1
Msh6P54276 Bhmt-ps1-201ENSMUST00000178743 1224 ntBASIC14.43□□□□□ -0.1
Msh6P54276 Gm23189-201ENSMUST00000178954 102 ntBASIC14.43□□□□□ -0.1
Msh6P54276 Gm25100-201ENSMUST00000179750 101 ntBASIC14.43□□□□□ -0.1
Msh6P54276 Gm23064-201ENSMUST00000179866 101 ntBASIC14.43□□□□□ -0.1
Msh6P54276 Gm43752-201ENSMUST00000198475 697 ntBASIC14.43□□□□□ -0.1
Msh6P54276 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC14.43□□□□□ -0.1
Msh6P54276 Trav11n-201ENSMUST00000200113 343 ntBASIC14.43□□□□□ -0.1
Msh6P54276 Chn2-210ENSMUST00000203091 755 ntTSL 5 BASIC14.43□□□□□ -0.1
Msh6P54276 Olfr692-202ENSMUST00000217827 1126 ntBASIC14.43□□□□□ -0.1
Msh6P54276 Gm31513-201ENSMUST00000223261 684 ntTSL 2 BASIC14.43□□□□□ -0.1
Msh6P54276 Olfr692-201ENSMUST00000098152 1126 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Msh6P54276 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Msh6P54276 Fbxo15-201ENSMUST00000037718 1437 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Msh6P54276 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC14.43□□□□□ -0.1
Msh6P54276 Gm6831-202ENSMUST00000213025 1673 ntBASIC14.43□□□□□ -0.1
Msh6P54276 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Msh6P54276 Gm6157-201ENSMUST00000199935 1897 ntBASIC14.43□□□□□ -0.1
Msh6P54276 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Msh6P54276 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Msh6P54276 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Msh6P54276 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Msh6P54276 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Msh6P54276 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Msh6P54276 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
Msh6P54276 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Msh6P54276 Gm43127-201ENSMUST00000195890 2789 ntBASIC14.42□□□□□ -0.1
Msh6P54276 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Msh6P54276 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Msh6P54276 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Msh6P54276 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Msh6P54276 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Msh6P54276 Creb3l4-201ENSMUST00000029547 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Msh6P54276 Ppp1r32-201ENSMUST00000038842 1458 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Msh6P54276 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC14.42□□□□□ -0.1
Msh6P54276 Gm6158-201ENSMUST00000109467 904 ntBASIC14.42□□□□□ -0.1
Msh6P54276 Cbx7-202ENSMUST00000109615 710 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Msh6P54276 Gm8302-201ENSMUST00000119217 852 ntBASIC14.42□□□□□ -0.1
Msh6P54276 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Msh6P54276 Aamdc-207ENSMUST00000138060 467 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Msh6P54276 Bloc1s1-205ENSMUST00000153731 613 ntTSL 5 BASIC14.42□□□□□ -0.1
Msh6P54276 Gm11634-201ENSMUST00000154147 755 ntAPPRIS ALT2 TSL 3 BASIC14.42□□□□□ -0.1
Msh6P54276 Scgb2b7-201ENSMUST00000178258 520 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Msh6P54276 Gm5267-201ENSMUST00000191574 1045 ntBASIC14.42□□□□□ -0.1
Msh6P54276 9530034A14Rik-201ENSMUST00000197919 1083 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Msh6P54276 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC14.42□□□□□ -0.1
Msh6P54276 AC142266.1-201ENSMUST00000228107 415 ntBASIC14.42□□□□□ -0.1
Msh6P54276 Tsga10ip-201ENSMUST00000044527 487 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Msh6P54276 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Msh6P54276 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Msh6P54276 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Msh6P54276 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Msh6P54276 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Msh6P54276 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Msh6P54276 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Msh6P54276 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Msh6P54276 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Msh6P54276 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
Msh6P54276 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Msh6P54276 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Msh6P54276 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Msh6P54276 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Msh6P54276 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Msh6P54276 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Msh6P54276 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC14.41□□□□□ -0.1
Msh6P54276 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Msh6P54276 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Msh6P54276 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms