Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Rpl41-201ENSMUST00000176010 582 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Atxn1P54254 Rpl41-204ENSMUST00000176906 509 ntAPPRIS ALT2 TSL 3 BASIC11.42□□□□□ -0.58
Atxn1P54254 Gm26982-201ENSMUST00000182250 1151 ntBASIC11.42□□□□□ -0.58
Atxn1P54254 Gm9884-201ENSMUST00000194343 1222 ntBASIC11.42□□□□□ -0.58
Atxn1P54254 Gm35960-201ENSMUST00000202712 767 ntBASIC11.42□□□□□ -0.58
Atxn1P54254 Gm7082-201ENSMUST00000209880 969 ntBASIC11.42□□□□□ -0.58
Atxn1P54254 AC114645.1-201ENSMUST00000215831 187 ntBASIC11.42□□□□□ -0.58
Atxn1P54254 D730050B12Rik-201ENSMUST00000223149 585 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Atxn1P54254 Pgap2-201ENSMUST00000033292 1201 ntAPPRIS ALT1 TSL 5 BASIC11.42□□□□□ -0.58
Atxn1P54254 Atp5j2-201ENSMUST00000037056 540 ntTSL 5 BASIC11.42□□□□□ -0.58
Atxn1P54254 Olfr584-201ENSMUST00000098210 964 ntBASIC11.42□□□□□ -0.58
Atxn1P54254 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Atxn1P54254 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Atxn1P54254 Bpifb4-201ENSMUST00000099181 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Atxn1P54254 Gm19692-201ENSMUST00000203856 2084 ntBASIC11.42□□□□□ -0.58
Atxn1P54254 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Atxn1P54254 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Atxn1P54254 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC11.41□□□□□ -0.58
Atxn1P54254 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Atxn1P54254 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Atxn1P54254 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Atxn1P54254 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Atxn1P54254 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Atxn1P54254 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Atxn1P54254 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Atxn1P54254 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Atxn1P54254 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Atxn1P54254 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Atxn1P54254 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC11.41□□□□□ -0.58
Atxn1P54254 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC11.41□□□□□ -0.58
Atxn1P54254 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC11.41□□□□□ -0.58
Atxn1P54254 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC11.41□□□□□ -0.58
Atxn1P54254 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Atxn1P54254 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Atxn1P54254 Triml2-201ENSMUST00000163869 1467 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Atxn1P54254 Gm29100-201ENSMUST00000187564 4410 ntBASIC11.41□□□□□ -0.58
Atxn1P54254 Gm23255-201ENSMUST00000102244 110 ntBASIC11.41□□□□□ -0.58
Atxn1P54254 Tnfrsf9-203ENSMUST00000105671 1278 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Atxn1P54254 Nnmt-202ENSMUST00000119426 912 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Atxn1P54254 Nudt12os-201ENSMUST00000145848 939 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Atxn1P54254 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC11.41□□□□□ -0.58
Atxn1P54254 Prdx2-208ENSMUST00000164807 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Atxn1P54254 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC11.41□□□□□ -0.58
Atxn1P54254 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Atxn1P54254 Gm37638-201ENSMUST00000194337 1123 ntBASIC11.41□□□□□ -0.58
Atxn1P54254 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Atxn1P54254 Ighv1-86-201ENSMUST00000200562 353 ntBASIC11.41□□□□□ -0.58
Atxn1P54254 2610318N02Rik-202ENSMUST00000207116 1156 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Atxn1P54254 Gm4930-201ENSMUST00000219926 1087 ntBASIC11.41□□□□□ -0.58
Atxn1P54254 Gm4811-201ENSMUST00000220879 1220 ntBASIC11.41□□□□□ -0.58
Atxn1P54254 Tnfrsf9-202ENSMUST00000060901 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Atxn1P54254 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Atxn1P54254 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Atxn1P54254 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Atxn1P54254 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Atxn1P54254 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Atxn1P54254 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Atxn1P54254 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Atxn1P54254 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Atxn1P54254 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Atxn1P54254 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Atxn1P54254 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC11.41□□□□□ -0.58
Atxn1P54254 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Atxn1P54254 Gm42706-201ENSMUST00000199733 1910 ntBASIC11.41□□□□□ -0.58
Atxn1P54254 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Atxn1P54254 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC11.41□□□□□ -0.58
Atxn1P54254 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Atxn1P54254 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Atxn1P54254 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Atxn1P54254 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Atxn1P54254 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Atxn1P54254 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Atxn1P54254 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Atxn1P54254 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Atxn1P54254 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Atxn1P54254 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Atxn1P54254 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Atxn1P54254 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Atxn1P54254 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Atxn1P54254 Gm25053-201ENSMUST00000103982 133 ntBASIC11.4□□□□□ -0.58
Atxn1P54254 Gm25922-201ENSMUST00000104281 130 ntBASIC11.4□□□□□ -0.58
Atxn1P54254 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Atxn1P54254 Gm11957-201ENSMUST00000118304 779 ntBASIC11.4□□□□□ -0.58
Atxn1P54254 Gng5-ps-201ENSMUST00000120931 205 ntBASIC11.4□□□□□ -0.58
Atxn1P54254 C1qtnf7-202ENSMUST00000121872 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Atxn1P54254 Slfn5os-201ENSMUST00000127074 574 ntTSL 2 BASIC11.4□□□□□ -0.58
Atxn1P54254 Gm11634-201ENSMUST00000154147 755 ntAPPRIS ALT2 TSL 3 BASIC11.4□□□□□ -0.58
Atxn1P54254 Gm12906-201ENSMUST00000154610 441 ntBASIC11.4□□□□□ -0.58
Atxn1P54254 Gm24679-201ENSMUST00000158762 111 ntBASIC11.4□□□□□ -0.58
Atxn1P54254 Gm28833-201ENSMUST00000189671 559 ntBASIC11.4□□□□□ -0.58
Atxn1P54254 Nmbr-207ENSMUST00000190751 921 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Atxn1P54254 1700017M07Rik-201ENSMUST00000198307 940 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Atxn1P54254 Gm25053-202ENSMUST00000199731 132 ntBASIC11.4□□□□□ -0.58
Atxn1P54254 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Atxn1P54254 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Atxn1P54254 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Atxn1P54254 Fam212a-201ENSMUST00000048568 1025 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Atxn1P54254 Tprg-201ENSMUST00000056087 1084 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Atxn1P54254 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Atxn1P54254 Gm13306-201ENSMUST00000098122 418 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 70.4 ms