Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC11.03□□□□□ -0.64
Tnfsf4P43488 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC11.03□□□□□ -0.64
Tnfsf4P43488 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Tnfsf4P43488 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC11.03□□□□□ -0.64
Tnfsf4P43488 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC11.03□□□□□ -0.64
Tnfsf4P43488 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC11.03□□□□□ -0.64
Tnfsf4P43488 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Tnfsf4P43488 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Tnfsf4P43488 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Tnfsf4P43488 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Tnfsf4P43488 Gm20495-201ENSMUST00000173902 235 ntBASIC11.03□□□□□ -0.64
Tnfsf4P43488 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Tnfsf4P43488 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Tnfsf4P43488 Mir7677-201ENSMUST00000184226 67 ntBASIC11.03□□□□□ -0.64
Tnfsf4P43488 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Tnfsf4P43488 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC11.03□□□□□ -0.64
Tnfsf4P43488 Gm45113-201ENSMUST00000207518 165 ntBASIC11.03□□□□□ -0.64
Tnfsf4P43488 Gm8913-201ENSMUST00000209491 641 ntBASIC11.03□□□□□ -0.64
Tnfsf4P43488 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC11.03□□□□□ -0.64
Tnfsf4P43488 AC160929.1-201ENSMUST00000221247 415 ntBASIC11.03□□□□□ -0.64
Tnfsf4P43488 AC102569.1-201ENSMUST00000221563 685 ntBASIC11.03□□□□□ -0.64
Tnfsf4P43488 Gm270-201ENSMUST00000223010 976 ntBASIC11.03□□□□□ -0.64
Tnfsf4P43488 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Tnfsf4P43488 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Tnfsf4P43488 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Tnfsf4P43488 Piwil1-201ENSMUST00000086056 4016 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Tnfsf4P43488 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Tnfsf4P43488 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Tnfsf4P43488 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Tnfsf4P43488 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC11.03□□□□□ -0.64
Tnfsf4P43488 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Tnfsf4P43488 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Tnfsf4P43488 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Tnfsf4P43488 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Tnfsf4P43488 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Tnfsf4P43488 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
Tnfsf4P43488 Rgs12-203ENSMUST00000114280 2777 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Tnfsf4P43488 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Tnfsf4P43488 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC11.03□□□□□ -0.64
Tnfsf4P43488 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Tnfsf4P43488 Sipa1l2-202ENSMUST00000212168 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Tnfsf4P43488 Baiap3-206ENSMUST00000182825 3862 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Tnfsf4P43488 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Tnfsf4P43488 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC11.03□□□□□ -0.64
Tnfsf4P43488 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Tnfsf4P43488 Gm14005-209ENSMUST00000224993 1832 ntBASIC11.02□□□□□ -0.64
Tnfsf4P43488 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC11.02□□□□□ -0.64
Tnfsf4P43488 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.64
Tnfsf4P43488 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Tnfsf4P43488 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Tnfsf4P43488 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC11.02□□□□□ -0.65
Tnfsf4P43488 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Tnfsf4P43488 Fam84a-201ENSMUST00000020926 4164 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Tnfsf4P43488 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC11.02□□□□□ -0.65
Tnfsf4P43488 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Tnfsf4P43488 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Tnfsf4P43488 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Tnfsf4P43488 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Tnfsf4P43488 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Tnfsf4P43488 Gm13996-201ENSMUST00000118456 430 ntBASIC11.02□□□□□ -0.65
Tnfsf4P43488 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC11.02□□□□□ -0.65
Tnfsf4P43488 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Tnfsf4P43488 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Tnfsf4P43488 Gm18038-201ENSMUST00000197900 485 ntBASIC11.02□□□□□ -0.65
Tnfsf4P43488 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Tnfsf4P43488 Gm21027-201ENSMUST00000219300 1236 ntBASIC11.02□□□□□ -0.65
Tnfsf4P43488 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC11.02□□□□□ -0.65
Tnfsf4P43488 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Tnfsf4P43488 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Tnfsf4P43488 Gm5537-201ENSMUST00000091117 1252 ntBASIC11.02□□□□□ -0.65
Tnfsf4P43488 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Tnfsf4P43488 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Tnfsf4P43488 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Tnfsf4P43488 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Tnfsf4P43488 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Tnfsf4P43488 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Tnfsf4P43488 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Tnfsf4P43488 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Tnfsf4P43488 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Tnfsf4P43488 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Tnfsf4P43488 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Tnfsf4P43488 Asb15-201ENSMUST00000031696 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Tnfsf4P43488 Gm28042-203ENSMUST00000156805 2844 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Tnfsf4P43488 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Tnfsf4P43488 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Tnfsf4P43488 Nxpe5-204ENSMUST00000161047 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Tnfsf4P43488 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Tnfsf4P43488 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Tnfsf4P43488 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC11.01□□□□□ -0.65
Tnfsf4P43488 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC11.01□□□□□ -0.65
Tnfsf4P43488 Acin1-203ENSMUST00000111484 4048 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Tnfsf4P43488 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Tnfsf4P43488 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Tnfsf4P43488 Gm45416-201ENSMUST00000209713 2201 ntBASIC11.01□□□□□ -0.65
Tnfsf4P43488 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Tnfsf4P43488 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Tnfsf4P43488 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Tnfsf4P43488 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Tnfsf4P43488 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Tnfsf4P43488 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 62 ms