Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Gm13275-201ENSMUST00000178347 549 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Cdx2P43241 Gm13277-201ENSMUST00000178480 549 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Cdx2P43241 Gm13279-201ENSMUST00000178602 549 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Cdx2P43241 Gm13289-201ENSMUST00000179158 549 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Cdx2P43241 Gm13276-201ENSMUST00000179372 549 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Cdx2P43241 Gm13287-201ENSMUST00000179490 549 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Cdx2P43241 4930578M01Rik-201ENSMUST00000180490 907 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Cdx2P43241 Gm26647-201ENSMUST00000180816 1255 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Cdx2P43241 D430013B06Rik-201ENSMUST00000192922 1872 ntBASIC10.88□□□□□ -0.67
Cdx2P43241 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC10.88□□□□□ -0.67
Cdx2P43241 Trav11n-201ENSMUST00000200113 343 ntBASIC10.88□□□□□ -0.67
Cdx2P43241 Gm43249-201ENSMUST00000200464 458 ntBASIC10.88□□□□□ -0.67
Cdx2P43241 Gm44008-201ENSMUST00000204345 412 ntBASIC10.88□□□□□ -0.67
Cdx2P43241 Gm39397-201ENSMUST00000212331 228 ntTSL 5 BASIC10.88□□□□□ -0.67
Cdx2P43241 Gm6653-201ENSMUST00000218063 1288 ntBASIC10.88□□□□□ -0.67
Cdx2P43241 Gm9102-201ENSMUST00000219250 465 ntBASIC10.88□□□□□ -0.67
Cdx2P43241 Gm2696-202ENSMUST00000220393 684 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Cdx2P43241 Id2-203ENSMUST00000222667 958 ntBASIC10.88□□□□□ -0.67
Cdx2P43241 Nudt13-207ENSMUST00000224311 1574 ntBASIC10.88□□□□□ -0.67
Cdx2P43241 Myoz2-201ENSMUST00000029761 1181 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cdx2P43241 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Cdx2P43241 Ffar2-201ENSMUST00000053156 2301 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cdx2P43241 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Cdx2P43241 BC049762-202ENSMUST00000065950 883 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cdx2P43241 Elob-201ENSMUST00000069579 508 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cdx2P43241 Krtap4-1-201ENSMUST00000081007 1015 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Cdx2P43241 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Cdx2P43241 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cdx2P43241 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cdx2P43241 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Cdx2P43241 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Cdx2P43241 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Cdx2P43241 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cdx2P43241 Ppp1r32-201ENSMUST00000038842 1458 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cdx2P43241 Bpifb4-201ENSMUST00000099181 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cdx2P43241 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cdx2P43241 Pax5-205ENSMUST00000107827 1315 ntTSL 5 BASIC10.87□□□□□ -0.67
Cdx2P43241 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Cdx2P43241 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Cdx2P43241 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cdx2P43241 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Cdx2P43241 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Cdx2P43241 Gm5171-201ENSMUST00000214944 1415 ntBASIC10.87□□□□□ -0.67
Cdx2P43241 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cdx2P43241 Gm23612-201ENSMUST00000103823 110 ntBASIC10.87□□□□□ -0.67
Cdx2P43241 Gm14740-201ENSMUST00000118538 1150 ntBASIC10.87□□□□□ -0.67
Cdx2P43241 Gm15196-201ENSMUST00000121406 482 ntBASIC10.87□□□□□ -0.67
Cdx2P43241 Gm13783-201ENSMUST00000131634 732 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Cdx2P43241 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Cdx2P43241 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Cdx2P43241 Pax4-202ENSMUST00000164519 1229 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cdx2P43241 Gm17606-201ENSMUST00000169818 234 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Cdx2P43241 Pax4-203ENSMUST00000171089 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cdx2P43241 Gm26272-201ENSMUST00000179241 132 ntBASIC10.87□□□□□ -0.67
Cdx2P43241 Gm23576-201ENSMUST00000179918 110 ntBASIC10.87□□□□□ -0.67
Cdx2P43241 Selenos-204ENSMUST00000206044 911 ntTSL 3 BASIC10.87□□□□□ -0.67
Cdx2P43241 Gm45542-201ENSMUST00000210456 438 ntTSL 2 BASIC10.87□□□□□ -0.67
Cdx2P43241 Olfr692-202ENSMUST00000217827 1126 ntBASIC10.87□□□□□ -0.67
Cdx2P43241 BC106175-201ENSMUST00000218578 695 ntTSL 5 BASIC10.87□□□□□ -0.67
Cdx2P43241 AC115304.2-201ENSMUST00000226399 332 ntBASIC10.87□□□□□ -0.67
Cdx2P43241 Olfr692-201ENSMUST00000098152 1126 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Cdx2P43241 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Cdx2P43241 Lrp2bp-201ENSMUST00000066451 1525 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Cdx2P43241 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Cdx2P43241 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Cdx2P43241 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Cdx2P43241 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC10.87□□□□□ -0.67
Cdx2P43241 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cdx2P43241 CT010447.1-201ENSMUST00000225657 1608 ntBASIC10.87□□□□□ -0.67
Cdx2P43241 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cdx2P43241 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cdx2P43241 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Cdx2P43241 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cdx2P43241 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cdx2P43241 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cdx2P43241 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC10.87□□□□□ -0.67
Cdx2P43241 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Cdx2P43241 Gm20554-201ENSMUST00000177421 2352 ntBASIC10.87□□□□□ -0.67
Cdx2P43241 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cdx2P43241 Triml2-201ENSMUST00000163869 1467 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Cdx2P43241 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC10.87□□□□□ -0.67
Cdx2P43241 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cdx2P43241 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cdx2P43241 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Cdx2P43241 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Cdx2P43241 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cdx2P43241 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC10.86□□□□□ -0.67
Cdx2P43241 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cdx2P43241 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cdx2P43241 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cdx2P43241 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cdx2P43241 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC10.86□□□□□ -0.67
Cdx2P43241 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC10.86□□□□□ -0.67
Cdx2P43241 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cdx2P43241 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cdx2P43241 Gm43773-201ENSMUST00000198548 2162 ntBASIC10.86□□□□□ -0.67
Cdx2P43241 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Cdx2P43241 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Cdx2P43241 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Cdx2P43241 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms