Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 A930003O13Rik-202ENSMUST00000197486 3098 ntBASIC11.75□□□□□ -0.53
HttP42859 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC11.75□□□□□ -0.53
HttP42859 Slc12a8-203ENSMUST00000119173 2382 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
HttP42859 Wbp1l-204ENSMUST00000138302 3900 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
HttP42859 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
HttP42859 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
HttP42859 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
HttP42859 Gm43364-201ENSMUST00000196046 3274 ntBASIC11.75□□□□□ -0.53
HttP42859 Gm45663-201ENSMUST00000210429 1632 ntBASIC11.75□□□□□ -0.53
HttP42859 Supt20-ps-201ENSMUST00000117999 1560 ntBASIC11.75□□□□□ -0.53
HttP42859 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC11.75□□□□□ -0.53
HttP42859 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
HttP42859 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
HttP42859 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
HttP42859 Mup-ps29-201ENSMUST00000122281 202 ntBASIC11.75□□□□□ -0.53
HttP42859 Gm5501-201ENSMUST00000165917 832 ntBASIC11.75□□□□□ -0.53
HttP42859 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC11.75□□□□□ -0.53
HttP42859 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
HttP42859 AC155245.1-201ENSMUST00000222266 1804 ntBASIC11.75□□□□□ -0.53
HttP42859 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC11.75□□□□□ -0.53
HttP42859 5930420M18Rik-201ENSMUST00000202893 2281 ntBASIC11.75□□□□□ -0.53
HttP42859 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
HttP42859 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
HttP42859 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
HttP42859 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
HttP42859 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
HttP42859 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
HttP42859 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
HttP42859 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
HttP42859 Rpain-202ENSMUST00000108529 282 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
HttP42859 Gm13215-201ENSMUST00000117559 472 ntBASIC11.75□□□□□ -0.53
HttP42859 Gm44805-201ENSMUST00000127648 765 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
HttP42859 Mir6981-201ENSMUST00000184293 115 ntBASIC11.75□□□□□ -0.53
HttP42859 Gm19090-201ENSMUST00000218187 774 ntBASIC11.75□□□□□ -0.53
HttP42859 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC11.75□□□□□ -0.53
HttP42859 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
HttP42859 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
HttP42859 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
HttP42859 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
HttP42859 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
HttP42859 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
HttP42859 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
HttP42859 Gm43127-201ENSMUST00000195890 2789 ntBASIC11.74□□□□□ -0.53
HttP42859 Gm38194-201ENSMUST00000194529 2211 ntBASIC11.74□□□□□ -0.53
HttP42859 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
HttP42859 Sun1-205ENSMUST00000110883 3714 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
HttP42859 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
HttP42859 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
HttP42859 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
HttP42859 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
HttP42859 Gm8809-201ENSMUST00000119367 743 ntBASIC11.74□□□□□ -0.53
HttP42859 Gm13543-201ENSMUST00000121230 796 ntBASIC11.74□□□□□ -0.53
HttP42859 H2-Pb-201ENSMUST00000172731 531 ntBASIC11.74□□□□□ -0.53
HttP42859 Gm6098-201ENSMUST00000180234 330 ntBASIC11.74□□□□□ -0.53
HttP42859 Gm44008-201ENSMUST00000204345 412 ntBASIC11.74□□□□□ -0.53
HttP42859 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC11.74□□□□□ -0.53
HttP42859 Tex29-201ENSMUST00000033909 822 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
HttP42859 Gm10015-201ENSMUST00000072570 465 ntBASIC11.74□□□□□ -0.53
HttP42859 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC11.74□□□□□ -0.53
HttP42859 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
HttP42859 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
HttP42859 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
HttP42859 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
HttP42859 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
HttP42859 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
HttP42859 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC11.74□□□□□ -0.53
HttP42859 AC147366.2-201ENSMUST00000226859 2038 ntBASIC11.74□□□□□ -0.53
HttP42859 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
HttP42859 Prl8a1-202ENSMUST00000095926 1682 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
HttP42859 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
HttP42859 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
HttP42859 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
HttP42859 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
HttP42859 Gm22900-201ENSMUST00000104538 130 ntBASIC11.74□□□□□ -0.53
HttP42859 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
HttP42859 Rhox3f-201ENSMUST00000115172 833 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
HttP42859 Gm11235-201ENSMUST00000117763 333 ntBASIC11.74□□□□□ -0.53
HttP42859 Snrnp27-201ENSMUST00000001186 885 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
HttP42859 Gm12499-201ENSMUST00000121961 546 ntBASIC11.74□□□□□ -0.53
HttP42859 Gm14108-201ENSMUST00000122234 494 ntBASIC11.74□□□□□ -0.53
HttP42859 Rhox3f-203ENSMUST00000184451 1008 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
HttP42859 Ints5-203ENSMUST00000191089 568 ntTSL 5 BASIC11.74□□□□□ -0.53
HttP42859 1110025M09Rik-201ENSMUST00000192082 855 ntBASIC11.74□□□□□ -0.53
HttP42859 Lsm3-205ENSMUST00000206947 618 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
HttP42859 8030423J24Rik-201ENSMUST00000022091 869 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
HttP42859 Krtap21-1-201ENSMUST00000078422 748 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
HttP42859 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
HttP42859 Gm42962-201ENSMUST00000201966 2325 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
HttP42859 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
HttP42859 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
HttP42859 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
HttP42859 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
HttP42859 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
HttP42859 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
HttP42859 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
HttP42859 Gm12679-201ENSMUST00000123899 636 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
HttP42859 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC11.73□□□□□ -0.53
HttP42859 Gm17764-201ENSMUST00000185925 391 ntBASIC11.73□□□□□ -0.53
HttP42859 Gm3116-201ENSMUST00000189440 1116 ntBASIC11.73□□□□□ -0.53
HttP42859 Ighv1-60-201ENSMUST00000195816 405 ntBASIC11.73□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 71.1 ms