Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Prss51-204ENSMUST00000224112 1042 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Cxcl12P40224 4930546C10Rik-201ENSMUST00000025428 363 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Cxcl12P40224 Eif4ebp3-201ENSMUST00000036765 744 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cxcl12P40224 Olfr985-201ENSMUST00000060345 1116 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Cxcl12P40224 Prr19-201ENSMUST00000080288 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cxcl12P40224 Gm7589-201ENSMUST00000085631 534 ntBASIC11.77□□□□□ -0.53
Cxcl12P40224 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Cxcl12P40224 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Cxcl12P40224 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC11.77□□□□□ -0.53
Cxcl12P40224 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cxcl12P40224 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cxcl12P40224 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Cxcl12P40224 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Cxcl12P40224 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cxcl12P40224 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cxcl12P40224 AC166361.2-201ENSMUST00000219269 1415 ntBASIC11.77□□□□□ -0.53
Cxcl12P40224 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
Cxcl12P40224 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Cxcl12P40224 Gstm4-203ENSMUST00000178808 1462 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Cxcl12P40224 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Cxcl12P40224 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cxcl12P40224 Rps6ka6-204ENSMUST00000113428 4135 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Cxcl12P40224 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cxcl12P40224 Gm37437-201ENSMUST00000194451 1937 ntBASIC11.76□□□□□ -0.53
Cxcl12P40224 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cxcl12P40224 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cxcl12P40224 Gm45546-201ENSMUST00000211053 2394 ntBASIC11.76□□□□□ -0.53
Cxcl12P40224 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cxcl12P40224 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Cxcl12P40224 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cxcl12P40224 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Cxcl12P40224 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cxcl12P40224 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cxcl12P40224 Ccdc78-201ENSMUST00000095500 1651 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Cxcl12P40224 B2m-201ENSMUST00000102476 860 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cxcl12P40224 Gm23439-201ENSMUST00000104292 132 ntBASIC11.76□□□□□ -0.53
Cxcl12P40224 Itpa-ps1-201ENSMUST00000117207 597 ntBASIC11.76□□□□□ -0.53
Cxcl12P40224 Gm15746-201ENSMUST00000120684 1027 ntBASIC11.76□□□□□ -0.53
Cxcl12P40224 Gsta3-202ENSMUST00000121676 894 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Cxcl12P40224 Gm3828-201ENSMUST00000121817 257 ntBASIC11.76□□□□□ -0.53
Cxcl12P40224 Gm22344-201ENSMUST00000122642 278 ntBASIC11.76□□□□□ -0.53
Cxcl12P40224 Gm829-201ENSMUST00000123741 465 ntTSL 3 BASIC11.76□□□□□ -0.53
Cxcl12P40224 C030013C21Rik-201ENSMUST00000133400 795 ntTSL 3 BASIC11.76□□□□□ -0.53
Cxcl12P40224 Gm26875-201ENSMUST00000181006 950 ntBASIC11.76□□□□□ -0.53
Cxcl12P40224 Ighv5-8-202ENSMUST00000191967 337 ntBASIC11.76□□□□□ -0.53
Cxcl12P40224 Gm37723-201ENSMUST00000194480 565 ntBASIC11.76□□□□□ -0.53
Cxcl12P40224 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC11.76□□□□□ -0.53
Cxcl12P40224 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC11.76□□□□□ -0.53
Cxcl12P40224 4930557B06Rik-201ENSMUST00000200193 381 ntBASIC11.76□□□□□ -0.53
Cxcl12P40224 Ghrl-204ENSMUST00000203770 891 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cxcl12P40224 Ghrl-205ENSMUST00000204163 447 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cxcl12P40224 CT025531.1-201ENSMUST00000214534 622 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Cxcl12P40224 AC154213.1-201ENSMUST00000228234 583 ntBASIC11.76□□□□□ -0.53
Cxcl12P40224 Gzmk-201ENSMUST00000038212 1028 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cxcl12P40224 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cxcl12P40224 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cxcl12P40224 Kcne3-202ENSMUST00000170954 1315 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cxcl12P40224 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cxcl12P40224 AC153524.2-201ENSMUST00000218351 1375 ntTSL 5 BASIC11.76□□□□□ -0.53
Cxcl12P40224 Gm43570-201ENSMUST00000199951 3688 ntBASIC11.76□□□□□ -0.53
Cxcl12P40224 Gm42748-201ENSMUST00000199354 2341 ntBASIC11.76□□□□□ -0.53
Cxcl12P40224 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cxcl12P40224 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Cxcl12P40224 Gm5171-201ENSMUST00000214944 1415 ntBASIC11.76□□□□□ -0.53
Cxcl12P40224 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cxcl12P40224 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cxcl12P40224 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC11.76□□□□□ -0.53
Cxcl12P40224 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cxcl12P40224 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Cxcl12P40224 Brcc3-203ENSMUST00000118428 2093 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Cxcl12P40224 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cxcl12P40224 Hmox1-201ENSMUST00000005548 1569 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cxcl12P40224 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cxcl12P40224 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Cxcl12P40224 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cxcl12P40224 Wipf2-201ENSMUST00000037480 7011 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cxcl12P40224 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Cxcl12P40224 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Cxcl12P40224 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Cxcl12P40224 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC11.75□□□□□ -0.53
Cxcl12P40224 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cxcl12P40224 Gm10614-201ENSMUST00000181414 2538 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Cxcl12P40224 Gm24933-201ENSMUST00000103762 110 ntBASIC11.75□□□□□ -0.53
Cxcl12P40224 Gm23252-201ENSMUST00000103776 110 ntBASIC11.75□□□□□ -0.53
Cxcl12P40224 Gm23604-201ENSMUST00000104311 132 ntBASIC11.75□□□□□ -0.53
Cxcl12P40224 Il1rn-202ENSMUST00000114485 728 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Cxcl12P40224 Gm11700-201ENSMUST00000119409 403 ntBASIC11.75□□□□□ -0.53
Cxcl12P40224 Gm13624-201ENSMUST00000120263 462 ntBASIC11.75□□□□□ -0.53
Cxcl12P40224 9230111E07Rik-201ENSMUST00000124850 811 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Cxcl12P40224 Gm15952-202ENSMUST00000144542 556 ntTSL 3 BASIC11.75□□□□□ -0.53
Cxcl12P40224 Gm27191-201ENSMUST00000145973 448 ntTSL 3 BASIC11.75□□□□□ -0.53
Cxcl12P40224 Tpi1-203ENSMUST00000149610 802 ntTSL 2 BASIC11.75□□□□□ -0.53
Cxcl12P40224 C330021F23Rik-204ENSMUST00000151633 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cxcl12P40224 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Cxcl12P40224 Gm16547-201ENSMUST00000159474 293 ntBASIC11.75□□□□□ -0.53
Cxcl12P40224 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC11.75□□□□□ -0.53
Cxcl12P40224 Gm26443-201ENSMUST00000179610 110 ntBASIC11.75□□□□□ -0.53
Cxcl12P40224 1110020A21Rik-201ENSMUST00000181147 853 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Cxcl12P40224 Mir6359-201ENSMUST00000183668 81 ntBASIC11.75□□□□□ -0.53
Cxcl12P40224 Gm43460-201ENSMUST00000202491 1057 ntBASIC11.75□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 77.5 ms