Protein–RNA interactions for Protein: P29788

Vtn, Vitronectin, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VtnP29788 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
VtnP29788 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
VtnP29788 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC10.4□□□□□ -0.75
VtnP29788 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
VtnP29788 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.75
VtnP29788 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC10.4□□□□□ -0.75
VtnP29788 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC10.4□□□□□ -0.75
VtnP29788 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.75
VtnP29788 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
VtnP29788 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
VtnP29788 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
VtnP29788 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC10.39□□□□□ -0.75
VtnP29788 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
VtnP29788 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
VtnP29788 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
VtnP29788 Gm9544-201ENSMUST00000223349 2482 ntBASIC10.39□□□□□ -0.75
VtnP29788 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
VtnP29788 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
VtnP29788 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
VtnP29788 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
VtnP29788 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC10.39□□□□□ -0.75
VtnP29788 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
VtnP29788 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
VtnP29788 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC10.39□□□□□ -0.75
VtnP29788 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
VtnP29788 Gm20495-201ENSMUST00000173902 235 ntBASIC10.39□□□□□ -0.75
VtnP29788 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
VtnP29788 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
VtnP29788 Gm9463-201ENSMUST00000206707 601 ntBASIC10.39□□□□□ -0.75
VtnP29788 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC10.39□□□□□ -0.75
VtnP29788 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC10.39□□□□□ -0.75
VtnP29788 Snora73b-201ENSMUST00000083419 205 ntBASIC10.39□□□□□ -0.75
VtnP29788 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
VtnP29788 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
VtnP29788 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
VtnP29788 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
VtnP29788 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
VtnP29788 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC10.39□□□□□ -0.75
VtnP29788 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
VtnP29788 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
VtnP29788 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
VtnP29788 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
VtnP29788 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
VtnP29788 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
VtnP29788 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
VtnP29788 Gm5859-201ENSMUST00000165401 2324 ntBASIC10.39□□□□□ -0.75
VtnP29788 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
VtnP29788 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
VtnP29788 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
VtnP29788 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
VtnP29788 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
VtnP29788 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
VtnP29788 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
VtnP29788 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC10.38□□□□□ -0.75
VtnP29788 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
VtnP29788 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
VtnP29788 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC10.38□□□□□ -0.75
VtnP29788 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
VtnP29788 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
VtnP29788 Fam84a-201ENSMUST00000020926 4164 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
VtnP29788 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
VtnP29788 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC10.38□□□□□ -0.75
VtnP29788 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
VtnP29788 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
VtnP29788 Gm14193-201ENSMUST00000105067 153 ntBASIC10.38□□□□□ -0.75
VtnP29788 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC10.38□□□□□ -0.75
VtnP29788 Gm7150-201ENSMUST00000122032 981 ntBASIC10.38□□□□□ -0.75
VtnP29788 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC10.38□□□□□ -0.75
VtnP29788 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
VtnP29788 Gm24844-201ENSMUST00000158679 127 ntBASIC10.38□□□□□ -0.75
VtnP29788 Gm5778-201ENSMUST00000171003 1072 ntBASIC10.38□□□□□ -0.75
VtnP29788 Mir8115-201ENSMUST00000184992 119 ntBASIC10.38□□□□□ -0.75
VtnP29788 Gm17831-201ENSMUST00000205579 900 ntBASIC10.38□□□□□ -0.75
VtnP29788 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
VtnP29788 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC10.38□□□□□ -0.75
VtnP29788 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC10.38□□□□□ -0.75
VtnP29788 AC122408.1-201ENSMUST00000218949 218 ntBASIC10.38□□□□□ -0.75
VtnP29788 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC10.38□□□□□ -0.75
VtnP29788 AC129219.2-201ENSMUST00000224324 701 ntBASIC10.38□□□□□ -0.75
VtnP29788 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
VtnP29788 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
VtnP29788 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
VtnP29788 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
VtnP29788 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
VtnP29788 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
VtnP29788 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
VtnP29788 Gm43984-201ENSMUST00000204572 2864 ntBASIC10.38□□□□□ -0.75
VtnP29788 AC158355.1-201ENSMUST00000215895 1705 ntBASIC10.38□□□□□ -0.75
VtnP29788 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
VtnP29788 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
VtnP29788 Gm6903-201ENSMUST00000160509 1366 ntBASIC10.38□□□□□ -0.75
VtnP29788 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
VtnP29788 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
VtnP29788 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
VtnP29788 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
VtnP29788 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC10.38□□□□□ -0.75
VtnP29788 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
VtnP29788 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
VtnP29788 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
VtnP29788 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms