Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Gm37931-201ENSMUST00000194686 2866 ntBASIC12.83□□□□□ -0.36
Col2a1P28481 Tubb2b-201ENSMUST00000075774 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col2a1P28481 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col2a1P28481 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col2a1P28481 Supt3-201ENSMUST00000050630 1508 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col2a1P28481 B2m-201ENSMUST00000102476 860 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col2a1P28481 Rbfox1-202ENSMUST00000115841 1191 ntTSL 5 BASIC12.83□□□□□ -0.36
Col2a1P28481 Myl3-202ENSMUST00000124267 575 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Col2a1P28481 Gm29521-201ENSMUST00000187061 745 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Col2a1P28481 Gm44552-201ENSMUST00000205458 1247 ntBASIC12.83□□□□□ -0.36
Col2a1P28481 Gm44753-202ENSMUST00000208297 562 ntTSL 5 BASIC12.83□□□□□ -0.36
Col2a1P28481 CT025679.1-201ENSMUST00000227106 449 ntBASIC12.83□□□□□ -0.36
Col2a1P28481 AC156501.1-201ENSMUST00000228219 270 ntBASIC12.83□□□□□ -0.36
Col2a1P28481 Mustn1-201ENSMUST00000040715 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col2a1P28481 Prr19-201ENSMUST00000080288 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col2a1P28481 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col2a1P28481 Cwc25-202ENSMUST00000107579 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col2a1P28481 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Col2a1P28481 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col2a1P28481 Anxa11-202ENSMUST00000112364 1625 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Col2a1P28481 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC12.83□□□□□ -0.36
Col2a1P28481 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Col2a1P28481 Gm44740-201ENSMUST00000205603 1614 ntBASIC12.83□□□□□ -0.36
Col2a1P28481 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col2a1P28481 Ces2f-203ENSMUST00000212926 1430 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Col2a1P28481 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC12.82□□□□□ -0.36
Col2a1P28481 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col2a1P28481 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col2a1P28481 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col2a1P28481 CT030159.3-201ENSMUST00000222936 1481 ntTSL 5 BASIC12.82□□□□□ -0.36
Col2a1P28481 Rtn4ip1-201ENSMUST00000054418 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col2a1P28481 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col2a1P28481 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col2a1P28481 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col2a1P28481 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col2a1P28481 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Col2a1P28481 Cfap61-201ENSMUST00000116398 1561 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Col2a1P28481 Gpr143-201ENSMUST00000026383 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col2a1P28481 Gm14274-201ENSMUST00000117182 615 ntBASIC12.82□□□□□ -0.36
Col2a1P28481 Gm11619-201ENSMUST00000117474 237 ntBASIC12.82□□□□□ -0.36
Col2a1P28481 Gm8876-201ENSMUST00000120768 1122 ntBASIC12.82□□□□□ -0.36
Col2a1P28481 Gm15620-201ENSMUST00000122949 270 ntBASIC12.82□□□□□ -0.36
Col2a1P28481 Uckl1os-207ENSMUST00000152365 442 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Col2a1P28481 Scgb2b7-201ENSMUST00000178258 520 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col2a1P28481 Gm7255-201ENSMUST00000187371 908 ntBASIC12.82□□□□□ -0.36
Col2a1P28481 Gm19918-201ENSMUST00000194858 400 ntBASIC12.82□□□□□ -0.36
Col2a1P28481 Gm44605-201ENSMUST00000206892 949 ntBASIC12.82□□□□□ -0.36
Col2a1P28481 Gm18204-201ENSMUST00000209835 793 ntBASIC12.82□□□□□ -0.36
Col2a1P28481 AC134793.1-202ENSMUST00000227444 803 ntBASIC12.82□□□□□ -0.36
Col2a1P28481 Gm31718-201ENSMUST00000212406 1646 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Col2a1P28481 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Col2a1P28481 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC12.82□□□□□ -0.36
Col2a1P28481 Glb1l-201ENSMUST00000113623 2339 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Col2a1P28481 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col2a1P28481 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col2a1P28481 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col2a1P28481 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col2a1P28481 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col2a1P28481 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
Col2a1P28481 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Col2a1P28481 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col2a1P28481 Slc38a5-203ENSMUST00000115591 1853 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Col2a1P28481 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col2a1P28481 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Col2a1P28481 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col2a1P28481 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col2a1P28481 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col2a1P28481 Gm11979-201ENSMUST00000119629 743 ntBASIC12.81□□□□□ -0.36
Col2a1P28481 Gm13783-201ENSMUST00000131634 732 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Col2a1P28481 Gm13572-201ENSMUST00000153675 559 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Col2a1P28481 Gm18733-202ENSMUST00000174447 401 ntBASIC12.81□□□□□ -0.36
Col2a1P28481 Gm23647-201ENSMUST00000175042 109 ntBASIC12.81□□□□□ -0.36
Col2a1P28481 Gm26119-201ENSMUST00000175601 104 ntBASIC12.81□□□□□ -0.36
Col2a1P28481 Rn5s-201ENSMUST00000177555 119 ntBASIC12.81□□□□□ -0.36
Col2a1P28481 n-R5s108-201ENSMUST00000177575 119 ntBASIC12.81□□□□□ -0.36
Col2a1P28481 n-R5s121-201ENSMUST00000177589 119 ntBASIC12.81□□□□□ -0.36
Col2a1P28481 n-R5s146-201ENSMUST00000177889 119 ntBASIC12.81□□□□□ -0.36
Col2a1P28481 Gm22109-201ENSMUST00000177995 119 ntBASIC12.81□□□□□ -0.36
Col2a1P28481 Gm22291-201ENSMUST00000178027 119 ntBASIC12.81□□□□□ -0.36
Col2a1P28481 n-R5s141-201ENSMUST00000178066 119 ntBASIC12.81□□□□□ -0.36
Col2a1P28481 Gm23284-201ENSMUST00000178069 119 ntBASIC12.81□□□□□ -0.36
Col2a1P28481 n-R5s100-201ENSMUST00000178106 119 ntBASIC12.81□□□□□ -0.36
Col2a1P28481 n-R5s111-201ENSMUST00000178203 119 ntBASIC12.81□□□□□ -0.36
Col2a1P28481 n-R5s105-201ENSMUST00000178499 119 ntBASIC12.81□□□□□ -0.36
Col2a1P28481 n-R5s149-201ENSMUST00000178520 119 ntBASIC12.81□□□□□ -0.36
Col2a1P28481 n-R5s103-201ENSMUST00000178755 119 ntBASIC12.81□□□□□ -0.36
Col2a1P28481 n-R5s123-201ENSMUST00000178804 119 ntBASIC12.81□□□□□ -0.36
Col2a1P28481 n-R5s142-201ENSMUST00000178820 119 ntBASIC12.81□□□□□ -0.36
Col2a1P28481 n-R5s144-201ENSMUST00000178859 119 ntBASIC12.81□□□□□ -0.36
Col2a1P28481 n-R5s139-201ENSMUST00000178975 119 ntBASIC12.81□□□□□ -0.36
Col2a1P28481 n-R5s134-201ENSMUST00000178983 119 ntBASIC12.81□□□□□ -0.36
Col2a1P28481 n-R5s136-201ENSMUST00000179080 119 ntBASIC12.81□□□□□ -0.36
Col2a1P28481 Gm25018-201ENSMUST00000179081 119 ntBASIC12.81□□□□□ -0.36
Col2a1P28481 n-R5s104-201ENSMUST00000179107 119 ntBASIC12.81□□□□□ -0.36
Col2a1P28481 n-R5s113-201ENSMUST00000179143 119 ntBASIC12.81□□□□□ -0.36
Col2a1P28481 n-R5s133-201ENSMUST00000179275 119 ntBASIC12.81□□□□□ -0.36
Col2a1P28481 n-R5s117-201ENSMUST00000179431 119 ntBASIC12.81□□□□□ -0.36
Col2a1P28481 Gm25212-201ENSMUST00000179432 119 ntBASIC12.81□□□□□ -0.36
Col2a1P28481 n-R5s138-201ENSMUST00000179476 119 ntBASIC12.81□□□□□ -0.36
Col2a1P28481 n-R5s122-201ENSMUST00000179500 119 ntBASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms