Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC11.79□□□□□ -0.52
Nfkb1P25799 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Nfkb1P25799 Gm7841-201ENSMUST00000122108 1629 ntBASIC11.79□□□□□ -0.52
Nfkb1P25799 Gm4900-201ENSMUST00000222046 1628 ntBASIC11.79□□□□□ -0.52
Nfkb1P25799 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nfkb1P25799 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Nfkb1P25799 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Nfkb1P25799 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC11.79□□□□□ -0.52
Nfkb1P25799 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Nfkb1P25799 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Nfkb1P25799 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC11.79□□□□□ -0.52
Nfkb1P25799 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC11.79□□□□□ -0.52
Nfkb1P25799 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC11.79□□□□□ -0.52
Nfkb1P25799 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC11.79□□□□□ -0.52
Nfkb1P25799 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC11.79□□□□□ -0.52
Nfkb1P25799 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Nfkb1P25799 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC11.79□□□□□ -0.52
Nfkb1P25799 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Nfkb1P25799 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC11.79□□□□□ -0.52
Nfkb1P25799 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Nfkb1P25799 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC11.79□□□□□ -0.52
Nfkb1P25799 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nfkb1P25799 AC136376.2-201ENSMUST00000228819 490 ntBASIC11.79□□□□□ -0.52
Nfkb1P25799 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nfkb1P25799 Gm23680-201ENSMUST00000083162 164 ntBASIC11.79□□□□□ -0.52
Nfkb1P25799 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC11.79□□□□□ -0.52
Nfkb1P25799 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nfkb1P25799 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nfkb1P25799 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Nfkb1P25799 Gm37660-201ENSMUST00000192754 1732 ntBASIC11.79□□□□□ -0.52
Nfkb1P25799 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Nfkb1P25799 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Nfkb1P25799 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nfkb1P25799 Gm37014-201ENSMUST00000194723 2253 ntBASIC11.79□□□□□ -0.52
Nfkb1P25799 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC11.79□□□□□ -0.52
Nfkb1P25799 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC11.79□□□□□ -0.52
Nfkb1P25799 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nfkb1P25799 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nfkb1P25799 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC11.78□□□□□ -0.52
Nfkb1P25799 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nfkb1P25799 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC11.78□□□□□ -0.52
Nfkb1P25799 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Nfkb1P25799 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nfkb1P25799 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Nfkb1P25799 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nfkb1P25799 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nfkb1P25799 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nfkb1P25799 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nfkb1P25799 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Nfkb1P25799 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nfkb1P25799 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nfkb1P25799 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nfkb1P25799 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nfkb1P25799 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC11.78□□□□□ -0.52
Nfkb1P25799 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC11.78□□□□□ -0.52
Nfkb1P25799 Gm15744-201ENSMUST00000161734 213 ntBASIC11.78□□□□□ -0.52
Nfkb1P25799 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Nfkb1P25799 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC11.78□□□□□ -0.52
Nfkb1P25799 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nfkb1P25799 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Nfkb1P25799 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC11.78□□□□□ -0.52
Nfkb1P25799 Gm19046-201ENSMUST00000221263 1298 ntBASIC11.78□□□□□ -0.52
Nfkb1P25799 Gm9873-201ENSMUST00000063891 1097 ntBASIC11.78□□□□□ -0.52
Nfkb1P25799 Olfr76-201ENSMUST00000087822 1048 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Nfkb1P25799 n-R5s211-201ENSMUST00000093689 119 ntBASIC11.78□□□□□ -0.52
Nfkb1P25799 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Nfkb1P25799 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nfkb1P25799 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nfkb1P25799 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Nfkb1P25799 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nfkb1P25799 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nfkb1P25799 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC11.78□□□□□ -0.52
Nfkb1P25799 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nfkb1P25799 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nfkb1P25799 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Nfkb1P25799 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nfkb1P25799 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Nfkb1P25799 Gm37859-201ENSMUST00000195529 2173 ntBASIC11.78□□□□□ -0.52
Nfkb1P25799 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nfkb1P25799 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nfkb1P25799 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nfkb1P25799 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Nfkb1P25799 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nfkb1P25799 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Nfkb1P25799 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nfkb1P25799 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nfkb1P25799 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC11.77□□□□□ -0.52
Nfkb1P25799 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Nfkb1P25799 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Nfkb1P25799 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Nfkb1P25799 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Nfkb1P25799 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Nfkb1P25799 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
Nfkb1P25799 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC11.77□□□□□ -0.52
Nfkb1P25799 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Nfkb1P25799 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nfkb1P25799 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nfkb1P25799 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nfkb1P25799 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nfkb1P25799 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC11.77□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms