Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC11.01□□□□□ -0.65
BdnfP21237 Gm44364-201ENSMUST00000198368 141 ntBASIC11.01□□□□□ -0.65
BdnfP21237 Gm43822-201ENSMUST00000200285 476 ntBASIC11.01□□□□□ -0.65
BdnfP21237 Gm8956-201ENSMUST00000203939 825 ntBASIC11.01□□□□□ -0.65
BdnfP21237 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC11.01□□□□□ -0.65
BdnfP21237 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC11.01□□□□□ -0.65
BdnfP21237 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
BdnfP21237 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
BdnfP21237 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
BdnfP21237 Gm43457-201ENSMUST00000200867 2409 ntBASIC11.01□□□□□ -0.65
BdnfP21237 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
BdnfP21237 1700001J11Rik-202ENSMUST00000190330 2463 ntBASIC11.01□□□□□ -0.65
BdnfP21237 Dhdds-201ENSMUST00000012262 3133 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
BdnfP21237 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
BdnfP21237 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC11.01□□□□□ -0.65
BdnfP21237 Pcdhb10-201ENSMUST00000051126 2851 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
BdnfP21237 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
BdnfP21237 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
BdnfP21237 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
BdnfP21237 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
BdnfP21237 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
BdnfP21237 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
BdnfP21237 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
BdnfP21237 AC125374.1-201ENSMUST00000213573 1400 ntBASIC11.01□□□□□ -0.65
BdnfP21237 Gm8320-201ENSMUST00000177584 1762 ntBASIC11□□□□□ -0.65
BdnfP21237 Gm8303-201ENSMUST00000178371 1762 ntBASIC11□□□□□ -0.65
BdnfP21237 Gm8331-201ENSMUST00000178433 1762 ntBASIC11□□□□□ -0.65
BdnfP21237 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
BdnfP21237 Ccdc129-201ENSMUST00000044729 3431 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
BdnfP21237 Gm38123-201ENSMUST00000194990 2779 ntBASIC11□□□□□ -0.65
BdnfP21237 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC11□□□□□ -0.65
BdnfP21237 Topors-201ENSMUST00000042575 3856 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
BdnfP21237 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
BdnfP21237 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
BdnfP21237 Matn2-205ENSMUST00000227759 3569 ntAPPRIS ALT2 BASIC11□□□□□ -0.65
BdnfP21237 Tfip11-201ENSMUST00000031288 3560 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
BdnfP21237 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC11□□□□□ -0.65
BdnfP21237 Pigq-219ENSMUST00000208071 2926 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
BdnfP21237 Gm26865-201ENSMUST00000180970 3284 ntTSL 1 (best) BASIC11□□□□□ -0.65
BdnfP21237 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC11□□□□□ -0.65
BdnfP21237 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC11□□□□□ -0.65
BdnfP21237 Esr2-205ENSMUST00000218621 3342 ntTSL 1 (best) BASIC11□□□□□ -0.65
BdnfP21237 Igf1-201ENSMUST00000062862 2292 ntTSL 2 BASIC11□□□□□ -0.65
BdnfP21237 Bbs12-202ENSMUST00000108121 2348 ntTSL 1 (best) BASIC11□□□□□ -0.65
BdnfP21237 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
BdnfP21237 Ptcd1-201ENSMUST00000031628 3087 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
BdnfP21237 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC11□□□□□ -0.65
BdnfP21237 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC11□□□□□ -0.65
BdnfP21237 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC11□□□□□ -0.65
BdnfP21237 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC11□□□□□ -0.65
BdnfP21237 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
BdnfP21237 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC11□□□□□ -0.65
BdnfP21237 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC11□□□□□ -0.65
BdnfP21237 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC11□□□□□ -0.65
BdnfP21237 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC11□□□□□ -0.65
BdnfP21237 AA914427-201ENSMUST00000193194 1166 ntBASIC11□□□□□ -0.65
BdnfP21237 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
BdnfP21237 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
BdnfP21237 Gm43962-201ENSMUST00000203898 190 ntBASIC11□□□□□ -0.65
BdnfP21237 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC11□□□□□ -0.65
BdnfP21237 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC11□□□□□ -0.65
BdnfP21237 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
BdnfP21237 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
BdnfP21237 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
BdnfP21237 Igsf3-202ENSMUST00000195164 3876 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
BdnfP21237 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC11□□□□□ -0.65
BdnfP21237 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC11□□□□□ -0.65
BdnfP21237 Pla2g5-201ENSMUST00000030524 2131 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
BdnfP21237 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
BdnfP21237 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
BdnfP21237 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
BdnfP21237 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC11□□□□□ -0.65
BdnfP21237 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
BdnfP21237 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
BdnfP21237 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC11□□□□□ -0.65
BdnfP21237 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
BdnfP21237 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
BdnfP21237 9430064I24Rik-201ENSMUST00000206516 2669 ntBASIC11□□□□□ -0.65
BdnfP21237 Txk-201ENSMUST00000113604 2260 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
BdnfP21237 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
BdnfP21237 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
BdnfP21237 Fam71e2-202ENSMUST00000174409 2716 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
BdnfP21237 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
BdnfP21237 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC11□□□□□ -0.65
BdnfP21237 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
BdnfP21237 AC115746.1-201ENSMUST00000228949 3617 ntBASIC10.99□□□□□ -0.65
BdnfP21237 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
BdnfP21237 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
BdnfP21237 Gm45889-202ENSMUST00000211255 2358 ntTSL 5 BASIC10.99□□□□□ -0.65
BdnfP21237 Gm43589-201ENSMUST00000199400 1523 ntBASIC10.99□□□□□ -0.65
BdnfP21237 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
BdnfP21237 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
BdnfP21237 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
BdnfP21237 Sept9-203ENSMUST00000100193 2924 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
BdnfP21237 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC10.99□□□□□ -0.65
BdnfP21237 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
BdnfP21237 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
BdnfP21237 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
BdnfP21237 Smim1-214ENSMUST00000182191 3535 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
BdnfP21237 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms