Protein–RNA interactions for Protein: P11370

Fv4, Retrovirus-related Env polyprotein from Fv-4 locus, mousemouse

Predictions only

Length 679 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fv4P11370 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Fv4P11370 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Fv4P11370 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Fv4P11370 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Fv4P11370 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Fv4P11370 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Fv4P11370 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Fv4P11370 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Fv4P11370 Gm7642-201ENSMUST00000216345 1809 ntBASIC11.05□□□□□ -0.64
Fv4P11370 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Fv4P11370 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Fv4P11370 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Fv4P11370 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Fv4P11370 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Fv4P11370 Flad1-202ENSMUST00000107426 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Fv4P11370 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Fv4P11370 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Fv4P11370 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC11.04□□□□□ -0.64
Fv4P11370 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Fv4P11370 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC11.04□□□□□ -0.64
Fv4P11370 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Fv4P11370 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Fv4P11370 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Fv4P11370 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Fv4P11370 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Fv4P11370 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Fv4P11370 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Fv4P11370 Gm6039-201ENSMUST00000121667 1250 ntBASIC11.04□□□□□ -0.64
Fv4P11370 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC11.04□□□□□ -0.64
Fv4P11370 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC11.04□□□□□ -0.64
Fv4P11370 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Fv4P11370 Gm44415-201ENSMUST00000204151 2112 ntBASIC11.04□□□□□ -0.64
Fv4P11370 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC11.04□□□□□ -0.64
Fv4P11370 AC141438.2-201ENSMUST00000215068 271 ntBASIC11.04□□□□□ -0.64
Fv4P11370 Gm18730-201ENSMUST00000218038 343 ntBASIC11.04□□□□□ -0.64
Fv4P11370 Gm6722-201ENSMUST00000221586 390 ntBASIC11.04□□□□□ -0.64
Fv4P11370 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Fv4P11370 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Fv4P11370 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC11.04□□□□□ -0.64
Fv4P11370 Gm8385-201ENSMUST00000058999 643 ntBASIC11.04□□□□□ -0.64
Fv4P11370 Gm10288-201ENSMUST00000084614 537 ntBASIC11.04□□□□□ -0.64
Fv4P11370 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Fv4P11370 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Fv4P11370 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Fv4P11370 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Fv4P11370 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC11.04□□□□□ -0.64
Fv4P11370 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC11.04□□□□□ -0.64
Fv4P11370 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Fv4P11370 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC11.04□□□□□ -0.64
Fv4P11370 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Fv4P11370 Gm14005-209ENSMUST00000224993 1832 ntBASIC11.04□□□□□ -0.64
Fv4P11370 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Fv4P11370 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Fv4P11370 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Fv4P11370 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC11.04□□□□□ -0.64
Fv4P11370 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Fv4P11370 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Fv4P11370 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Fv4P11370 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Fv4P11370 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Fv4P11370 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC11.03□□□□□ -0.64
Fv4P11370 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Fv4P11370 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Fv4P11370 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC11.03□□□□□ -0.64
Fv4P11370 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Fv4P11370 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Fv4P11370 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Fv4P11370 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Fv4P11370 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Fv4P11370 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Fv4P11370 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Fv4P11370 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Fv4P11370 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Fv4P11370 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Fv4P11370 Gm13916-201ENSMUST00000117368 628 ntBASIC11.03□□□□□ -0.64
Fv4P11370 Gm13263-201ENSMUST00000121271 838 ntBASIC11.03□□□□□ -0.64
Fv4P11370 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Fv4P11370 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Fv4P11370 Gm26083-201ENSMUST00000157904 193 ntBASIC11.03□□□□□ -0.64
Fv4P11370 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC11.03□□□□□ -0.64
Fv4P11370 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Fv4P11370 Uba52-ps-201ENSMUST00000183770 379 ntBASIC11.03□□□□□ -0.64
Fv4P11370 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC11.03□□□□□ -0.64
Fv4P11370 Gm9353-201ENSMUST00000200472 604 ntBASIC11.03□□□□□ -0.64
Fv4P11370 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Fv4P11370 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Fv4P11370 AC164437.3-201ENSMUST00000228323 347 ntBASIC11.03□□□□□ -0.64
Fv4P11370 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Fv4P11370 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Fv4P11370 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC11.03□□□□□ -0.64
Fv4P11370 Gm6831-202ENSMUST00000213025 1673 ntBASIC11.03□□□□□ -0.64
Fv4P11370 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Fv4P11370 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Fv4P11370 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Fv4P11370 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Fv4P11370 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Fv4P11370 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC11.03□□□□□ -0.64
Fv4P11370 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Fv4P11370 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Fv4P11370 Gm28424-201ENSMUST00000187393 1319 ntBASIC11.03□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 58.4 ms