Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 1700084F23Rik-202ENSMUST00000188461 747 ntTSL 3 BASIC13.28□□□□□ -0.28
Col1a1P11087 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col1a1P11087 Gm44498-201ENSMUST00000199509 111 ntBASIC13.28□□□□□ -0.28
Col1a1P11087 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC13.28□□□□□ -0.28
Col1a1P11087 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC13.28□□□□□ -0.28
Col1a1P11087 Pigx-212ENSMUST00000215073 765 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col1a1P11087 AC164429.1-201ENSMUST00000224210 518 ntBASIC13.28□□□□□ -0.28
Col1a1P11087 Cma1-202ENSMUST00000226280 1090 ntAPPRIS ALT2 BASIC13.28□□□□□ -0.28
Col1a1P11087 Cma1-201ENSMUST00000022834 1074 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col1a1P11087 Rnasek-201ENSMUST00000040428 611 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col1a1P11087 Prl7b1-201ENSMUST00000080595 925 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col1a1P11087 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col1a1P11087 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col1a1P11087 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Col1a1P11087 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC13.28□□□□□ -0.28
Col1a1P11087 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col1a1P11087 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col1a1P11087 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
Col1a1P11087 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Col1a1P11087 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
Col1a1P11087 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Col1a1P11087 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC13.27□□□□□ -0.28
Col1a1P11087 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Col1a1P11087 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Col1a1P11087 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Col1a1P11087 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Col1a1P11087 Usp2-208ENSMUST00000177054 2370 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Col1a1P11087 Gm44573-201ENSMUST00000191753 2370 ntBASIC13.27□□□□□ -0.28
Col1a1P11087 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC13.27□□□□□ -0.28
Col1a1P11087 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Col1a1P11087 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col1a1P11087 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Col1a1P11087 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col1a1P11087 Ptpn2-202ENSMUST00000120934 1497 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Col1a1P11087 Slc44a4-202ENSMUST00000169230 2246 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Col1a1P11087 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Col1a1P11087 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC13.27□□□□□ -0.29
Col1a1P11087 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col1a1P11087 Bcl2l11-204ENSMUST00000103211 672 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
Col1a1P11087 Gm23439-201ENSMUST00000104292 132 ntBASIC13.27□□□□□ -0.29
Col1a1P11087 Ccl19-ps1-201ENSMUST00000119621 327 ntBASIC13.27□□□□□ -0.29
Col1a1P11087 H2afb3-201ENSMUST00000122050 348 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Col1a1P11087 Gm15886-201ENSMUST00000123155 1250 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Col1a1P11087 Treml4-203ENSMUST00000136272 811 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col1a1P11087 Treml4-206ENSMUST00000154335 838 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col1a1P11087 Gm24294-201ENSMUST00000158295 277 ntBASIC13.27□□□□□ -0.29
Col1a1P11087 Gm7572-201ENSMUST00000182616 766 ntBASIC13.27□□□□□ -0.29
Col1a1P11087 Mir6973a-201ENSMUST00000183646 78 ntBASIC13.27□□□□□ -0.29
Col1a1P11087 Marc1-203ENSMUST00000189492 1239 ntTSL 5 BASIC13.27□□□□□ -0.29
Col1a1P11087 Gm9353-201ENSMUST00000200472 604 ntBASIC13.27□□□□□ -0.29
Col1a1P11087 Tnfrsf18-201ENSMUST00000040274 804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col1a1P11087 Gm14005-209ENSMUST00000224993 1832 ntBASIC13.27□□□□□ -0.29
Col1a1P11087 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC13.27□□□□□ -0.29
Col1a1P11087 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col1a1P11087 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col1a1P11087 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Col1a1P11087 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Col1a1P11087 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col1a1P11087 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col1a1P11087 Oprm1-222ENSMUST00000135502 1363 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Col1a1P11087 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC13.27□□□□□ -0.29
Col1a1P11087 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col1a1P11087 Cdip1-202ENSMUST00000117713 1964 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Col1a1P11087 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col1a1P11087 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Col1a1P11087 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col1a1P11087 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col1a1P11087 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC13.26□□□□□ -0.29
Col1a1P11087 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col1a1P11087 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC13.26□□□□□ -0.29
Col1a1P11087 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Col1a1P11087 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Col1a1P11087 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col1a1P11087 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col1a1P11087 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col1a1P11087 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col1a1P11087 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col1a1P11087 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Col1a1P11087 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col1a1P11087 Pfn1-202ENSMUST00000108549 608 ntTSL 2 BASIC13.26□□□□□ -0.29
Col1a1P11087 Olfr1263-201ENSMUST00000111507 1029 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Col1a1P11087 Gm12745-201ENSMUST00000121767 214 ntBASIC13.26□□□□□ -0.29
Col1a1P11087 9230111E07Rik-201ENSMUST00000124850 811 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Col1a1P11087 Gm14798-201ENSMUST00000139695 1189 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Col1a1P11087 Atad3aos-202ENSMUST00000150777 650 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Col1a1P11087 Anp32e-206ENSMUST00000169426 915 ntTSL 5 BASIC13.26□□□□□ -0.29
Col1a1P11087 n-R5s130-201ENSMUST00000178128 119 ntBASIC13.26□□□□□ -0.29
Col1a1P11087 Gm24312-201ENSMUST00000178677 119 ntBASIC13.26□□□□□ -0.29
Col1a1P11087 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC13.26□□□□□ -0.29
Col1a1P11087 n-R5s106-201ENSMUST00000179060 119 ntBASIC13.26□□□□□ -0.29
Col1a1P11087 n-R5s118-201ENSMUST00000179887 119 ntBASIC13.26□□□□□ -0.29
Col1a1P11087 Gm7880-201ENSMUST00000203748 871 ntBASIC13.26□□□□□ -0.29
Col1a1P11087 Cox6b1-204ENSMUST00000208838 354 ntTSL 3 BASIC13.26□□□□□ -0.29
Col1a1P11087 Cklf-210ENSMUST00000212939 737 ntAPPRIS ALT2 TSL 3 BASIC13.26□□□□□ -0.29
Col1a1P11087 AC158986.2-201ENSMUST00000227487 618 ntBASIC13.26□□□□□ -0.29
Col1a1P11087 4930546C10Rik-201ENSMUST00000025428 363 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Col1a1P11087 Ngp-201ENSMUST00000035061 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col1a1P11087 Olfr115-201ENSMUST00000076936 939 ntAPPRIS P2 BASIC13.26□□□□□ -0.29
Col1a1P11087 Krtap3-3-201ENSMUST00000092700 736 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Col1a1P11087 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms