Protein–RNA interactions for Protein: P09026

Hoxb3, Homeobox protein Hox-B3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb3P09026 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Hoxb3P09026 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Hoxb3P09026 Gm12668-201ENSMUST00000134966 575 ntTSL 3 BASIC11.67□□□□□ -0.54
Hoxb3P09026 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Hoxb3P09026 Samd13-204ENSMUST00000147113 729 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Hoxb3P09026 Gm26901-202ENSMUST00000193106 256 ntTSL 3 BASIC11.67□□□□□ -0.54
Hoxb3P09026 Gm38117-201ENSMUST00000194653 939 ntBASIC11.67□□□□□ -0.54
Hoxb3P09026 Gm42836-201ENSMUST00000197198 728 ntTSL 5 BASIC11.67□□□□□ -0.54
Hoxb3P09026 Gm6370-202ENSMUST00000198912 1017 ntAPPRIS ALT2 TSL 3 BASIC11.67□□□□□ -0.54
Hoxb3P09026 4930466K18Rik-201ENSMUST00000219458 906 ntBASIC11.67□□□□□ -0.54
Hoxb3P09026 Timm9-210ENSMUST00000221892 734 ntTSL 5 BASIC11.67□□□□□ -0.54
Hoxb3P09026 AC154257.1-202ENSMUST00000224729 843 ntBASIC11.67□□□□□ -0.54
Hoxb3P09026 CT571271.1-201ENSMUST00000227071 670 ntBASIC11.67□□□□□ -0.54
Hoxb3P09026 AC115784.1-201ENSMUST00000227687 1010 ntBASIC11.67□□□□□ -0.54
Hoxb3P09026 AC142266.1-201ENSMUST00000228107 415 ntBASIC11.67□□□□□ -0.54
Hoxb3P09026 Gm8615-201ENSMUST00000025307 771 ntBASIC11.67□□□□□ -0.54
Hoxb3P09026 Mt4-201ENSMUST00000034207 398 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Hoxb3P09026 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Hoxb3P09026 Vmn1r195-201ENSMUST00000091736 1088 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Hoxb3P09026 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Hoxb3P09026 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Hoxb3P09026 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Hoxb3P09026 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Hoxb3P09026 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Hoxb3P09026 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Hoxb3P09026 Gm45832-201ENSMUST00000212762 1443 ntBASIC11.67□□□□□ -0.54
Hoxb3P09026 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Hoxb3P09026 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Hoxb3P09026 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Hoxb3P09026 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Hoxb3P09026 Gm26818-201ENSMUST00000181367 1360 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Hoxb3P09026 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Hoxb3P09026 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Hoxb3P09026 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Hoxb3P09026 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC11.66□□□□□ -0.54
Hoxb3P09026 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Hoxb3P09026 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Hoxb3P09026 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Hoxb3P09026 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
Hoxb3P09026 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Hoxb3P09026 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Hoxb3P09026 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Hoxb3P09026 Gm9972-201ENSMUST00000069051 1533 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Hoxb3P09026 Gm12022-201ENSMUST00000143311 1340 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Hoxb3P09026 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC11.66□□□□□ -0.54
Hoxb3P09026 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Hoxb3P09026 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Hoxb3P09026 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Hoxb3P09026 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Hoxb3P09026 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Hoxb3P09026 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Hoxb3P09026 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Hoxb3P09026 Mir466f-3-201ENSMUST00000104788 94 ntBASIC11.66□□□□□ -0.54
Hoxb3P09026 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Hoxb3P09026 Fam3a-204ENSMUST00000114141 1243 ntTSL 5 BASIC11.66□□□□□ -0.54
Hoxb3P09026 Gm15161-201ENSMUST00000117340 387 ntBASIC11.66□□□□□ -0.54
Hoxb3P09026 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC11.66□□□□□ -0.54
Hoxb3P09026 Gm12972-201ENSMUST00000152986 1006 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Hoxb3P09026 Gm22094-201ENSMUST00000158976 117 ntBASIC11.66□□□□□ -0.54
Hoxb3P09026 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Hoxb3P09026 Gm16147-201ENSMUST00000162143 373 ntBASIC11.66□□□□□ -0.54
Hoxb3P09026 Gm38250-202ENSMUST00000195108 462 ntTSL 3 BASIC11.66□□□□□ -0.54
Hoxb3P09026 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC11.66□□□□□ -0.54
Hoxb3P09026 Gm43186-201ENSMUST00000198130 824 ntBASIC11.66□□□□□ -0.54
Hoxb3P09026 Gm43912-201ENSMUST00000204352 538 ntBASIC11.66□□□□□ -0.54
Hoxb3P09026 Gm45040-201ENSMUST00000207742 578 ntTSL 3 BASIC11.66□□□□□ -0.54
Hoxb3P09026 Ss18l2-205ENSMUST00000215833 479 ntTSL 3 BASIC11.66□□□□□ -0.54
Hoxb3P09026 AC158518.1-201ENSMUST00000216435 320 ntTSL 5 BASIC11.66□□□□□ -0.54
Hoxb3P09026 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Hoxb3P09026 AC161374.2-201ENSMUST00000223662 596 ntBASIC11.66□□□□□ -0.54
Hoxb3P09026 AC165260.2-203ENSMUST00000224237 336 ntBASIC11.66□□□□□ -0.54
Hoxb3P09026 Pcgf5-204ENSMUST00000224772 1266 ntAPPRIS ALT1 BASIC11.66□□□□□ -0.54
Hoxb3P09026 AC133517.2-201ENSMUST00000226820 690 ntBASIC11.66□□□□□ -0.54
Hoxb3P09026 AC130477.1-201ENSMUST00000226982 420 ntBASIC11.66□□□□□ -0.54
Hoxb3P09026 Triap1-201ENSMUST00000031508 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Hoxb3P09026 Clec1b-201ENSMUST00000032262 1090 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Hoxb3P09026 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC11.66□□□□□ -0.54
Hoxb3P09026 Olfr771-201ENSMUST00000078914 954 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Hoxb3P09026 Cbx3-ps5-201ENSMUST00000091545 544 ntBASIC11.66□□□□□ -0.54
Hoxb3P09026 Cbx3-ps2-201ENSMUST00000099421 544 ntBASIC11.66□□□□□ -0.54
Hoxb3P09026 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Hoxb3P09026 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Hoxb3P09026 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Hoxb3P09026 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Hoxb3P09026 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Hoxb3P09026 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Hoxb3P09026 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Hoxb3P09026 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Hoxb3P09026 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Hoxb3P09026 Gm5380-201ENSMUST00000119296 2136 ntBASIC11.66□□□□□ -0.54
Hoxb3P09026 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Hoxb3P09026 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Hoxb3P09026 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Hoxb3P09026 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Hoxb3P09026 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Hoxb3P09026 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Hoxb3P09026 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Hoxb3P09026 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC11.66□□□□□ -0.54
Hoxb3P09026 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Hoxb3P09026 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 118.4 ms