Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hoxa4P06798 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Hoxa4P06798 CT025681.1-201ENSMUST00000225453 1855 ntBASIC11.29□□□□□ -0.6
Hoxa4P06798 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Hoxa4P06798 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hoxa4P06798 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hoxa4P06798 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC11.29□□□□□ -0.6
Hoxa4P06798 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC11.29□□□□□ -0.6
Hoxa4P06798 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Hoxa4P06798 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Hoxa4P06798 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hoxa4P06798 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hoxa4P06798 AC122811.1-201ENSMUST00000222257 2921 ntBASIC11.29□□□□□ -0.6
Hoxa4P06798 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hoxa4P06798 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hoxa4P06798 Gm9915-201ENSMUST00000066196 1383 ntBASIC11.28□□□□□ -0.6
Hoxa4P06798 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hoxa4P06798 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC11.28□□□□□ -0.6
Hoxa4P06798 AC167565.1-201ENSMUST00000226980 1833 ntBASIC11.28□□□□□ -0.6
Hoxa4P06798 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hoxa4P06798 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC11.28□□□□□ -0.6
Hoxa4P06798 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hoxa4P06798 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Hoxa4P06798 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC11.28□□□□□ -0.6
Hoxa4P06798 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Hoxa4P06798 Gm12029-201ENSMUST00000120073 832 ntBASIC11.28□□□□□ -0.6
Hoxa4P06798 Gm6485-201ENSMUST00000160676 439 ntBASIC11.28□□□□□ -0.6
Hoxa4P06798 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC11.28□□□□□ -0.6
Hoxa4P06798 Gm19459-201ENSMUST00000176240 835 ntBASIC11.28□□□□□ -0.6
Hoxa4P06798 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Hoxa4P06798 Mir7076-201ENSMUST00000183519 74 ntBASIC11.28□□□□□ -0.6
Hoxa4P06798 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC11.28□□□□□ -0.6
Hoxa4P06798 Gm9353-201ENSMUST00000200472 604 ntBASIC11.28□□□□□ -0.6
Hoxa4P06798 Gm18556-201ENSMUST00000219748 1031 ntBASIC11.28□□□□□ -0.6
Hoxa4P06798 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Hoxa4P06798 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Hoxa4P06798 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hoxa4P06798 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hoxa4P06798 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Hoxa4P06798 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Hoxa4P06798 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Hoxa4P06798 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hoxa4P06798 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hoxa4P06798 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC11.28□□□□□ -0.6
Hoxa4P06798 Gm9415-201ENSMUST00000200462 1321 ntBASIC11.28□□□□□ -0.6
Hoxa4P06798 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hoxa4P06798 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hoxa4P06798 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Hoxa4P06798 Gm44153-201ENSMUST00000204162 1580 ntBASIC11.28□□□□□ -0.6
Hoxa4P06798 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hoxa4P06798 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Hoxa4P06798 Ighg2b-202ENSMUST00000192188 2566 ntAPPRIS P5 BASIC11.27□□□□□ -0.6
Hoxa4P06798 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Hoxa4P06798 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Hoxa4P06798 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC11.27□□□□□ -0.6
Hoxa4P06798 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Hoxa4P06798 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Hoxa4P06798 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Hoxa4P06798 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Hoxa4P06798 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Hoxa4P06798 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Hoxa4P06798 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC11.27□□□□□ -0.61
Hoxa4P06798 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Hoxa4P06798 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Hoxa4P06798 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Hoxa4P06798 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC11.27□□□□□ -0.61
Hoxa4P06798 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC11.27□□□□□ -0.61
Hoxa4P06798 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Hoxa4P06798 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Hoxa4P06798 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Hoxa4P06798 Gm8111-201ENSMUST00000117659 987 ntBASIC11.27□□□□□ -0.61
Hoxa4P06798 Gm12463-201ENSMUST00000118271 849 ntBASIC11.27□□□□□ -0.61
Hoxa4P06798 Mup-ps29-201ENSMUST00000122281 202 ntBASIC11.27□□□□□ -0.61
Hoxa4P06798 Gm11642-201ENSMUST00000150442 440 ntTSL 5 BASIC11.27□□□□□ -0.61
Hoxa4P06798 Gm24992-201ENSMUST00000157412 130 ntBASIC11.27□□□□□ -0.61
Hoxa4P06798 Gm22138-201ENSMUST00000158748 128 ntBASIC11.27□□□□□ -0.61
Hoxa4P06798 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Hoxa4P06798 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Hoxa4P06798 Gm3508-201ENSMUST00000186012 792 ntBASIC11.27□□□□□ -0.61
Hoxa4P06798 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC11.27□□□□□ -0.61
Hoxa4P06798 Gm37826-201ENSMUST00000195329 322 ntBASIC11.27□□□□□ -0.61
Hoxa4P06798 Gm43058-201ENSMUST00000197645 625 ntBASIC11.27□□□□□ -0.61
Hoxa4P06798 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC11.27□□□□□ -0.61
Hoxa4P06798 AC141438.2-201ENSMUST00000215068 271 ntBASIC11.27□□□□□ -0.61
Hoxa4P06798 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Hoxa4P06798 Gm19046-201ENSMUST00000221263 1298 ntBASIC11.27□□□□□ -0.61
Hoxa4P06798 AC159002.1-201ENSMUST00000226714 924 ntBASIC11.27□□□□□ -0.61
Hoxa4P06798 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Hoxa4P06798 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Hoxa4P06798 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Hoxa4P06798 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Hoxa4P06798 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Hoxa4P06798 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Hoxa4P06798 Eid3-201ENSMUST00000211623 1305 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Hoxa4P06798 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Hoxa4P06798 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Hoxa4P06798 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Hoxa4P06798 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Hoxa4P06798 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Hoxa4P06798 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 58.4 ms