Protein–RNA interactions for Protein: P04925

Prnp, Major prion protein, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrnpP04925 Gm25343-201ENSMUST00000157460 107 ntBASIC11.84□□□□□ -0.51
PrnpP04925 Pax4-202ENSMUST00000164519 1229 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
PrnpP04925 Gm3250-201ENSMUST00000167358 693 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
PrnpP04925 Gm3238-201ENSMUST00000168298 693 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
PrnpP04925 Pax4-203ENSMUST00000171089 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
PrnpP04925 Gm19246-201ENSMUST00000173599 255 ntBASIC11.84□□□□□ -0.51
PrnpP04925 Gm9507-202ENSMUST00000180157 654 ntBASIC11.84□□□□□ -0.51
PrnpP04925 Gm18801-201ENSMUST00000186616 536 ntBASIC11.84□□□□□ -0.51
PrnpP04925 E230014E18Rik-201ENSMUST00000215920 859 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
PrnpP04925 Gm9487-201ENSMUST00000216600 472 ntBASIC11.84□□□□□ -0.51
PrnpP04925 BC106175-202ENSMUST00000219344 1213 ntBASIC11.84□□□□□ -0.51
PrnpP04925 Hddc2-201ENSMUST00000000304 858 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
PrnpP04925 Krtap4-1-201ENSMUST00000081007 1015 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
PrnpP04925 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
PrnpP04925 Cast-212ENSMUST00000223309 1529 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
PrnpP04925 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
PrnpP04925 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
PrnpP04925 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
PrnpP04925 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
PrnpP04925 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
PrnpP04925 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC11.84□□□□□ -0.51
PrnpP04925 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
PrnpP04925 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
PrnpP04925 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
PrnpP04925 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
PrnpP04925 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
PrnpP04925 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
PrnpP04925 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
PrnpP04925 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
PrnpP04925 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
PrnpP04925 Klhdc10-206ENSMUST00000144272 1387 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
PrnpP04925 Ceacam9-201ENSMUST00000001984 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
PrnpP04925 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
PrnpP04925 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
PrnpP04925 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
PrnpP04925 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC11.83□□□□□ -0.52
PrnpP04925 Gm23612-201ENSMUST00000103823 110 ntBASIC11.83□□□□□ -0.52
PrnpP04925 Cdk5rap1-202ENSMUST00000109730 1227 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
PrnpP04925 Polr3c-205ENSMUST00000141377 808 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
PrnpP04925 Gm9372-201ENSMUST00000168454 430 ntBASIC11.83□□□□□ -0.52
PrnpP04925 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
PrnpP04925 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
PrnpP04925 Gm23576-201ENSMUST00000179918 110 ntBASIC11.83□□□□□ -0.52
PrnpP04925 Anapc16-203ENSMUST00000182152 847 ntTSL 2 BASIC11.83□□□□□ -0.52
PrnpP04925 Gm9916-201ENSMUST00000192943 1228 ntBASIC11.83□□□□□ -0.52
PrnpP04925 Gm34655-202ENSMUST00000215259 877 ntTSL 3 BASIC11.83□□□□□ -0.52
PrnpP04925 AC102847.1-202ENSMUST00000226313 1245 ntBASIC11.83□□□□□ -0.52
PrnpP04925 Tsga10ip-201ENSMUST00000044527 487 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
PrnpP04925 Rpl7-201ENSMUST00000058437 1163 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
PrnpP04925 Actg1-201ENSMUST00000062147 876 ntTSL 3 BASIC11.83□□□□□ -0.52
PrnpP04925 Gm25580-201ENSMUST00000083409 327 ntBASIC11.83□□□□□ -0.52
PrnpP04925 Uqcc3-201ENSMUST00000096253 829 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
PrnpP04925 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC11.83□□□□□ -0.52
PrnpP04925 Arhgap19-204ENSMUST00000177495 1652 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
PrnpP04925 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.52
PrnpP04925 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
PrnpP04925 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
PrnpP04925 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
PrnpP04925 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
PrnpP04925 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC11.83□□□□□ -0.52
PrnpP04925 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
PrnpP04925 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC11.83□□□□□ -0.52
PrnpP04925 Gm6268-201ENSMUST00000115253 1453 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
PrnpP04925 Gm11470-201ENSMUST00000118868 1475 ntBASIC11.83□□□□□ -0.52
PrnpP04925 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
PrnpP04925 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
PrnpP04925 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
PrnpP04925 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
PrnpP04925 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
PrnpP04925 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
PrnpP04925 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
PrnpP04925 Tmem237-205ENSMUST00000186794 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
PrnpP04925 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
PrnpP04925 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
PrnpP04925 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
PrnpP04925 Gm20554-201ENSMUST00000177421 2352 ntBASIC11.82□□□□□ -0.52
PrnpP04925 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
PrnpP04925 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
PrnpP04925 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
PrnpP04925 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
PrnpP04925 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
PrnpP04925 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
PrnpP04925 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
PrnpP04925 Nppa-201ENSMUST00000103230 865 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
PrnpP04925 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
PrnpP04925 Gm11554-201ENSMUST00000105056 890 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
PrnpP04925 Gm15196-201ENSMUST00000121406 482 ntBASIC11.82□□□□□ -0.52
PrnpP04925 Gm4917-201ENSMUST00000121452 650 ntBASIC11.82□□□□□ -0.52
PrnpP04925 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
PrnpP04925 Adora3-202ENSMUST00000164730 1219 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
PrnpP04925 Gm25677-201ENSMUST00000174983 72 ntBASIC11.82□□□□□ -0.52
PrnpP04925 Gm23400-201ENSMUST00000174994 102 ntBASIC11.82□□□□□ -0.52
PrnpP04925 Gm26463-201ENSMUST00000175065 101 ntBASIC11.82□□□□□ -0.52
PrnpP04925 Gm24332-201ENSMUST00000175102 102 ntBASIC11.82□□□□□ -0.52
PrnpP04925 Gm25959-201ENSMUST00000175112 102 ntBASIC11.82□□□□□ -0.52
PrnpP04925 Gm22475-201ENSMUST00000175169 102 ntBASIC11.82□□□□□ -0.52
PrnpP04925 Gm22903-201ENSMUST00000175193 102 ntBASIC11.82□□□□□ -0.52
PrnpP04925 Gm25070-201ENSMUST00000175237 102 ntBASIC11.82□□□□□ -0.52
PrnpP04925 Gm24159-201ENSMUST00000175264 102 ntBASIC11.82□□□□□ -0.52
PrnpP04925 Gm25299-201ENSMUST00000175283 102 ntBASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 75 ms