Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Gm13326-201ENSMUST00000118730 1011 ntBASIC8.34□□□□□ -1.07
TcraP01849 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC8.34□□□□□ -1.07
TcraP01849 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC8.34□□□□□ -1.07
TcraP01849 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC8.34□□□□□ -1.07
TcraP01849 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC8.34□□□□□ -1.07
TcraP01849 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC8.34□□□□□ -1.07
TcraP01849 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC8.34□□□□□ -1.07
TcraP01849 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
TcraP01849 Gm45925-201ENSMUST00000218882 744 ntBASIC8.34□□□□□ -1.07
TcraP01849 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
TcraP01849 Gm4935-201ENSMUST00000221316 1198 ntBASIC8.34□□□□□ -1.07
TcraP01849 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC8.34□□□□□ -1.07
TcraP01849 AC122459.1-201ENSMUST00000228373 885 ntBASIC8.34□□□□□ -1.07
TcraP01849 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
TcraP01849 Gm10076-201ENSMUST00000073238 384 ntBASIC8.34□□□□□ -1.07
TcraP01849 Gm22058-201ENSMUST00000083393 310 ntBASIC8.34□□□□□ -1.07
TcraP01849 Gm18806-201ENSMUST00000207607 1775 ntBASIC8.34□□□□□ -1.07
TcraP01849 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC8.34□□□□□ -1.07
TcraP01849 Gm7789-202ENSMUST00000211273 1400 ntBASIC8.34□□□□□ -1.07
TcraP01849 A830010M20Rik-208ENSMUST00000211896 5256 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
TcraP01849 Immt-205ENSMUST00000166938 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
TcraP01849 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.07
TcraP01849 Tmprss7-201ENSMUST00000114562 2587 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
TcraP01849 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC8.34□□□□□ -1.07
TcraP01849 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC8.34□□□□□ -1.07
TcraP01849 Fgf6-201ENSMUST00000000187 4657 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
TcraP01849 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC8.34□□□□□ -1.07
TcraP01849 Rxfp2-201ENSMUST00000065745 2539 ntAPPRIS P3 TSL 1 (best) BASIC8.34□□□□□ -1.07
TcraP01849 Gm26868-201ENSMUST00000181927 2655 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
TcraP01849 Gm43143-201ENSMUST00000196083 2023 ntBASIC8.34□□□□□ -1.07
TcraP01849 Gm8228-201ENSMUST00000189949 2192 ntBASIC8.34□□□□□ -1.08
TcraP01849 C130060K24Rik-203ENSMUST00000170608 2953 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.08
TcraP01849 Atxn7l1-204ENSMUST00000125192 2644 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
TcraP01849 4931406P16Rik-202ENSMUST00000108074 6224 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
TcraP01849 Prorsd1-202ENSMUST00000133103 2126 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
TcraP01849 Gm35850-202ENSMUST00000211705 2120 ntBASIC8.33□□□□□ -1.08
TcraP01849 Slc1a2-201ENSMUST00000005220 2127 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
TcraP01849 Celsr3-201ENSMUST00000024238 11547 ntAPPRIS P2 TSL 1 (best) BASIC8.33□□□□□ -1.08
TcraP01849 Ces3b-202ENSMUST00000093221 2403 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
TcraP01849 AC154537.1-201ENSMUST00000226101 1304 ntBASIC8.33□□□□□ -1.08
TcraP01849 Atp1a2-202ENSMUST00000097464 3186 ntTSL 5 BASIC8.33□□□□□ -1.08
TcraP01849 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
TcraP01849 Slf2-201ENSMUST00000096053 6880 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
TcraP01849 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
TcraP01849 Zzef1-201ENSMUST00000069395 11150 ntAPPRIS P2 TSL 5 BASIC8.33□□□□□ -1.08
TcraP01849 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
TcraP01849 Zmym6-201ENSMUST00000046751 4210 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
TcraP01849 Mfap3l-204ENSMUST00000161702 2215 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
TcraP01849 Dip2c-202ENSMUST00000169960 4801 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
TcraP01849 Mpp4-203ENSMUST00000114275 2982 ntAPPRIS P4 TSL 2 BASIC8.33□□□□□ -1.08
TcraP01849 Impa1-202ENSMUST00000118410 2988 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
TcraP01849 Ctsl-205ENSMUST00000222517 6168 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
TcraP01849 Cacna1d-204ENSMUST00000223803 6435 ntAPPRIS ALT2 BASIC8.33□□□□□ -1.08
TcraP01849 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
TcraP01849 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
TcraP01849 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC8.33□□□□□ -1.08
TcraP01849 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC8.33□□□□□ -1.08
TcraP01849 Gm15610-201ENSMUST00000120584 195 ntBASIC8.33□□□□□ -1.08
TcraP01849 Gm16177-201ENSMUST00000120728 718 ntBASIC8.33□□□□□ -1.08
TcraP01849 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
TcraP01849 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC8.33□□□□□ -1.08
TcraP01849 Gm16379-201ENSMUST00000161469 348 ntBASIC8.33□□□□□ -1.08
TcraP01849 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
TcraP01849 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
TcraP01849 Gm8835-201ENSMUST00000173096 1169 ntBASIC8.33□□□□□ -1.08
TcraP01849 Gm7553-201ENSMUST00000185805 1426 ntBASIC8.33□□□□□ -1.08
TcraP01849 Gm8762-201ENSMUST00000193486 339 ntBASIC8.33□□□□□ -1.08
TcraP01849 Gm44405-201ENSMUST00000198952 126 ntBASIC8.33□□□□□ -1.08
TcraP01849 Igkv2-116-201ENSMUST00000199327 362 ntBASIC8.33□□□□□ -1.08
TcraP01849 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
TcraP01849 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC8.33□□□□□ -1.08
TcraP01849 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
TcraP01849 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC8.33□□□□□ -1.08
TcraP01849 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC8.33□□□□□ -1.08
TcraP01849 AC125209.1-201ENSMUST00000225812 766 ntBASIC8.33□□□□□ -1.08
TcraP01849 Scamp2-201ENSMUST00000045791 2340 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
TcraP01849 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
TcraP01849 Hjurp-201ENSMUST00000054674 4878 ntAPPRIS P2 TSL 1 (best) BASIC8.33□□□□□ -1.08
TcraP01849 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
TcraP01849 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
TcraP01849 H2-M9-202ENSMUST00000087167 1070 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
TcraP01849 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
TcraP01849 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
TcraP01849 Cacna1c-214ENSMUST00000188106 6462 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
TcraP01849 Lct-201ENSMUST00000073490 6174 ntAPPRIS P1 TSL 2 BASIC8.33□□□□□ -1.08
TcraP01849 Usp11-201ENSMUST00000033383 3467 ntAPPRIS P1 TSL 2 BASIC8.33□□□□□ -1.08
TcraP01849 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC8.33□□□□□ -1.08
TcraP01849 Gm12799-201ENSMUST00000118151 2560 ntBASIC8.33□□□□□ -1.08
TcraP01849 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
TcraP01849 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
TcraP01849 Nrp1-201ENSMUST00000026917 3597 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
TcraP01849 Pigk-204ENSMUST00000159899 4737 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
TcraP01849 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
TcraP01849 Lsamp-201ENSMUST00000078873 2951 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
TcraP01849 Pou2f1-206ENSMUST00000111429 2679 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
TcraP01849 Lrsam1-201ENSMUST00000028132 3981 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
TcraP01849 Hk3-201ENSMUST00000052949 3219 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
TcraP01849 Dnajb12-204ENSMUST00000146590 3070 ntAPPRIS P2 TSL 1 (best) BASIC8.33□□□□□ -1.08
TcraP01849 Sorbs3-203ENSMUST00000227653 3061 ntAPPRIS ALT2 BASIC8.33□□□□□ -1.08
TcraP01849 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC8.33□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms