Protein–RNA interactions for Protein: O89029

Matn4, Matrilin-4, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn4O89029 Gm38151-201ENSMUST00000195085 289 ntBASIC10.78□□□□□ -0.68
Matn4O89029 Gm5714-201ENSMUST00000197343 566 ntBASIC10.78□□□□□ -0.68
Matn4O89029 Gm17812-201ENSMUST00000204935 318 ntBASIC10.78□□□□□ -0.68
Matn4O89029 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Matn4O89029 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC10.78□□□□□ -0.68
Matn4O89029 Gm13097-201ENSMUST00000210722 397 ntBASIC10.78□□□□□ -0.68
Matn4O89029 Gm270-201ENSMUST00000223010 976 ntBASIC10.78□□□□□ -0.68
Matn4O89029 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC10.78□□□□□ -0.68
Matn4O89029 Gm38273-201ENSMUST00000194987 2382 ntBASIC10.78□□□□□ -0.68
Matn4O89029 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Matn4O89029 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Matn4O89029 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC10.78□□□□□ -0.68
Matn4O89029 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Matn4O89029 Gm9129-201ENSMUST00000218173 1689 ntBASIC10.78□□□□□ -0.68
Matn4O89029 Usp17le-202ENSMUST00000211384 1885 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Matn4O89029 AC166359.1-201ENSMUST00000220243 1871 ntBASIC10.78□□□□□ -0.68
Matn4O89029 AC149588.2-201ENSMUST00000228182 1859 ntBASIC10.78□□□□□ -0.68
Matn4O89029 Pyurf-201ENSMUST00000053386 3573 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Matn4O89029 Ttll1-201ENSMUST00000016897 2057 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Matn4O89029 Zfp454-201ENSMUST00000050595 2059 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Matn4O89029 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Matn4O89029 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Matn4O89029 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Matn4O89029 Syt14-201ENSMUST00000016344 1904 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Matn4O89029 Trim16-202ENSMUST00000072639 1929 ntTSL 2 BASIC10.78□□□□□ -0.68
Matn4O89029 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Matn4O89029 Pced1a-201ENSMUST00000089581 3496 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Matn4O89029 Nfx1-201ENSMUST00000030133 4349 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Matn4O89029 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Matn4O89029 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Matn4O89029 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Matn4O89029 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Matn4O89029 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Matn4O89029 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.68
Matn4O89029 A330033J07Rik-201ENSMUST00000180921 2816 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Matn4O89029 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Matn4O89029 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Matn4O89029 AC174797.1-201ENSMUST00000224339 1649 ntBASIC10.77□□□□□ -0.68
Matn4O89029 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.68
Matn4O89029 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.68
Matn4O89029 Tmem8b-209ENSMUST00000167153 4101 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Matn4O89029 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Matn4O89029 Acsm2-202ENSMUST00000098084 2099 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Matn4O89029 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Matn4O89029 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Matn4O89029 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Matn4O89029 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Matn4O89029 Acin1-203ENSMUST00000111484 4048 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Matn4O89029 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Matn4O89029 Usp2-203ENSMUST00000114830 2122 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Matn4O89029 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC10.77□□□□□ -0.69
Matn4O89029 Gm12742-201ENSMUST00000117326 410 ntBASIC10.77□□□□□ -0.69
Matn4O89029 Gm5940-201ENSMUST00000117582 1068 ntBASIC10.77□□□□□ -0.69
Matn4O89029 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC10.77□□□□□ -0.69
Matn4O89029 Gm15276-201ENSMUST00000145953 498 ntBASIC10.77□□□□□ -0.69
Matn4O89029 Cd63-ps-202ENSMUST00000154992 717 ntBASIC10.77□□□□□ -0.69
Matn4O89029 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Matn4O89029 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Matn4O89029 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC10.77□□□□□ -0.69
Matn4O89029 Gm27627-201ENSMUST00000183644 150 ntBASIC10.77□□□□□ -0.69
Matn4O89029 Gm28686-201ENSMUST00000187404 609 ntBASIC10.77□□□□□ -0.69
Matn4O89029 Gm4857-201ENSMUST00000192718 785 ntBASIC10.77□□□□□ -0.69
Matn4O89029 Igkv2-116-201ENSMUST00000199327 362 ntBASIC10.77□□□□□ -0.69
Matn4O89029 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Matn4O89029 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Matn4O89029 Gm7399-201ENSMUST00000032395 858 ntBASIC10.77□□□□□ -0.69
Matn4O89029 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Matn4O89029 Gm5537-201ENSMUST00000091117 1252 ntBASIC10.77□□□□□ -0.69
Matn4O89029 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Matn4O89029 Gfra2-201ENSMUST00000022699 3472 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Matn4O89029 Gm28424-201ENSMUST00000187393 1319 ntBASIC10.77□□□□□ -0.69
Matn4O89029 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Matn4O89029 Hacl1-212ENSMUST00000167066 1566 ntTSL 5 BASIC10.77□□□□□ -0.69
Matn4O89029 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Matn4O89029 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Matn4O89029 AC155245.1-201ENSMUST00000222266 1804 ntBASIC10.77□□□□□ -0.69
Matn4O89029 Dld-201ENSMUST00000110857 2544 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Matn4O89029 Slc37a4-201ENSMUST00000165839 2086 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Matn4O89029 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Matn4O89029 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Matn4O89029 Gm31108-201ENSMUST00000204101 1633 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Matn4O89029 Rpe65-202ENSMUST00000196999 1863 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Matn4O89029 Colq-201ENSMUST00000112027 2837 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Matn4O89029 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Matn4O89029 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Matn4O89029 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Matn4O89029 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Matn4O89029 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Matn4O89029 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Matn4O89029 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Matn4O89029 AC154171.2-201ENSMUST00000225219 2652 ntBASIC10.76□□□□□ -0.69
Matn4O89029 1110051M20Rik-202ENSMUST00000094835 1498 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Matn4O89029 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Matn4O89029 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Matn4O89029 Gm46430-201ENSMUST00000220478 1989 ntTSL 3 BASIC10.76□□□□□ -0.69
Matn4O89029 Gm43860-201ENSMUST00000201742 2705 ntBASIC10.76□□□□□ -0.69
Matn4O89029 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Matn4O89029 Gm37031-201ENSMUST00000195487 2530 ntBASIC10.76□□□□□ -0.69
Matn4O89029 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Matn4O89029 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms