Protein–RNA interactions for Protein: O35134

Polr1a, DNA-directed RNA polymerase I subunit RPA1, mousemouse

Known RBP Predictions only

Length 1,717 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr1aO35134 Axin2-202ENSMUST00000106711 2551 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Polr1aO35134 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC17.31■□□□□ 0.36
Polr1aO35134 Gm12463-201ENSMUST00000118271 849 ntBASIC17.31■□□□□ 0.36
Polr1aO35134 Gm12136-201ENSMUST00000120460 1209 ntBASIC17.31■□□□□ 0.36
Polr1aO35134 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC17.31■□□□□ 0.36
Polr1aO35134 Gm24943-201ENSMUST00000158329 433 ntBASIC17.31■□□□□ 0.36
Polr1aO35134 Mir6953-201ENSMUST00000184745 68 ntBASIC17.31■□□□□ 0.36
Polr1aO35134 Gm6644-201ENSMUST00000186507 951 ntBASIC17.31■□□□□ 0.36
Polr1aO35134 Rps9-201ENSMUST00000006496 751 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Polr1aO35134 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Polr1aO35134 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Polr1aO35134 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Polr1aO35134 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Polr1aO35134 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC17.31■□□□□ 0.36
Polr1aO35134 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Polr1aO35134 1110051M20Rik-202ENSMUST00000094835 1498 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Polr1aO35134 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Polr1aO35134 CT010480.4-201ENSMUST00000224654 2283 ntBASIC17.31■□□□□ 0.36
Polr1aO35134 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Polr1aO35134 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Polr1aO35134 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Polr1aO35134 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Polr1aO35134 Ifna9-201ENSMUST00000102807 573 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Polr1aO35134 Tmem91-203ENSMUST00000108405 550 ntTSL 3 BASIC17.3■□□□□ 0.36
Polr1aO35134 Srp14-202ENSMUST00000110862 587 ntTSL 2 BASIC17.3■□□□□ 0.36
Polr1aO35134 Gm14798-201ENSMUST00000139695 1189 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Polr1aO35134 Gm7928-201ENSMUST00000181249 701 ntBASIC17.3■□□□□ 0.36
Polr1aO35134 Gm7765-201ENSMUST00000182585 974 ntBASIC17.3■□□□□ 0.36
Polr1aO35134 Gm7572-201ENSMUST00000182616 766 ntBASIC17.3■□□□□ 0.36
Polr1aO35134 Gm6358-202ENSMUST00000187643 489 ntAPPRIS P5 BASIC17.3■□□□□ 0.36
Polr1aO35134 Gm44753-202ENSMUST00000208297 562 ntTSL 5 BASIC17.3■□□□□ 0.36
Polr1aO35134 AC164087.2-201ENSMUST00000216206 1072 ntBASIC17.3■□□□□ 0.36
Polr1aO35134 4930546C10Rik-201ENSMUST00000025428 363 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Polr1aO35134 Gm5513-201ENSMUST00000072982 1218 ntBASIC17.3■□□□□ 0.36
Polr1aO35134 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Polr1aO35134 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Polr1aO35134 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Polr1aO35134 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Polr1aO35134 5730422E09Rik-201ENSMUST00000180733 1740 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Polr1aO35134 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Polr1aO35134 Gm5159-201ENSMUST00000212733 1652 ntBASIC17.3■□□□□ 0.36
Polr1aO35134 Hsd3b1-202ENSMUST00000107016 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Polr1aO35134 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC17.3■□□□□ 0.36
Polr1aO35134 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Polr1aO35134 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Polr1aO35134 Srd5a3-203ENSMUST00000113507 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Polr1aO35134 Gm38111-201ENSMUST00000194817 2741 ntBASIC17.3■□□□□ 0.36
Polr1aO35134 Gm8684-201ENSMUST00000195078 1564 ntBASIC17.3■□□□□ 0.36
Polr1aO35134 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Polr1aO35134 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Polr1aO35134 D3Ertd751e-204ENSMUST00000119572 1011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Polr1aO35134 AC167364.1-201ENSMUST00000221495 784 ntTSL 5 BASIC17.3■□□□□ 0.36
Polr1aO35134 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Polr1aO35134 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Polr1aO35134 Gm8873-201ENSMUST00000217847 1439 ntBASIC17.29■□□□□ 0.36
Polr1aO35134 Gm26908-201ENSMUST00000181856 1637 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Polr1aO35134 AC151836.1-201ENSMUST00000228730 1637 ntBASIC17.29■□□□□ 0.36
Polr1aO35134 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Polr1aO35134 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Polr1aO35134 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Polr1aO35134 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Polr1aO35134 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Polr1aO35134 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC17.29■□□□□ 0.36
Polr1aO35134 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Polr1aO35134 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Polr1aO35134 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Polr1aO35134 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Polr1aO35134 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Polr1aO35134 Gm5472-201ENSMUST00000178604 1678 ntBASIC17.29■□□□□ 0.36
Polr1aO35134 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Polr1aO35134 1700025C18Rik-201ENSMUST00000109304 702 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Polr1aO35134 1700112K13Rik-201ENSMUST00000141892 701 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Polr1aO35134 Fgfbp1-203ENSMUST00000199894 1228 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
Polr1aO35134 Gm6794-201ENSMUST00000203829 457 ntBASIC17.29■□□□□ 0.36
Polr1aO35134 Gm4930-201ENSMUST00000219926 1087 ntBASIC17.29■□□□□ 0.36
Polr1aO35134 CT010505.2-201ENSMUST00000227918 998 ntBASIC17.29■□□□□ 0.36
Polr1aO35134 Gimap7-201ENSMUST00000052503 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Polr1aO35134 Nek3-204ENSMUST00000178324 1989 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Polr1aO35134 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Polr1aO35134 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Polr1aO35134 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Polr1aO35134 AC154354.1-203ENSMUST00000225565 1364 ntBASIC17.29■□□□□ 0.36
Polr1aO35134 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Polr1aO35134 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Polr1aO35134 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC17.28■□□□□ 0.36
Polr1aO35134 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC17.28■□□□□ 0.36
Polr1aO35134 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Polr1aO35134 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Polr1aO35134 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Polr1aO35134 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Polr1aO35134 Hist1h4i-201ENSMUST00000102977 727 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Polr1aO35134 Rplp2-202ENSMUST00000106003 449 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Polr1aO35134 Tnni1-204ENSMUST00000139986 651 ntTSL 5 BASIC17.28■□□□□ 0.36
Polr1aO35134 Gm24346-201ENSMUST00000158712 194 ntBASIC17.28■□□□□ 0.36
Polr1aO35134 Gm6612-201ENSMUST00000170777 395 ntBASIC17.28■□□□□ 0.36
Polr1aO35134 Gm8756-201ENSMUST00000183250 929 ntBASIC17.28■□□□□ 0.36
Polr1aO35134 Mir6359-201ENSMUST00000183668 81 ntBASIC17.28■□□□□ 0.36
Polr1aO35134 Ywhaq-ps1-201ENSMUST00000206623 710 ntBASIC17.28■□□□□ 0.36
Polr1aO35134 Gm45670-201ENSMUST00000211382 711 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Polr1aO35134 Zfp445-205ENSMUST00000214626 1220 ntTSL 5 BASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms