Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Gm43622-201ENSMUST00000200140 2019 ntBASIC11.93□□□□□ -0.5
Ebf3O08791 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC11.93□□□□□ -0.5
Ebf3O08791 Gm38055-201ENSMUST00000195353 2217 ntBASIC11.93□□□□□ -0.5
Ebf3O08791 Gm23272-201ENSMUST00000104053 129 ntBASIC11.93□□□□□ -0.5
Ebf3O08791 Gm25063-201ENSMUST00000104666 94 ntBASIC11.93□□□□□ -0.5
Ebf3O08791 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ebf3O08791 Gm9089-201ENSMUST00000122027 526 ntBASIC11.93□□□□□ -0.5
Ebf3O08791 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC11.93□□□□□ -0.5
Ebf3O08791 Gm15744-201ENSMUST00000161734 213 ntBASIC11.93□□□□□ -0.5
Ebf3O08791 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Ebf3O08791 Gm38114-201ENSMUST00000191877 1232 ntBASIC11.93□□□□□ -0.5
Ebf3O08791 Gm9136-201ENSMUST00000193368 454 ntBASIC11.93□□□□□ -0.5
Ebf3O08791 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC11.93□□□□□ -0.5
Ebf3O08791 Gm45120-201ENSMUST00000208880 408 ntBASIC11.93□□□□□ -0.5
Ebf3O08791 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ebf3O08791 Gm9139-201ENSMUST00000218817 700 ntBASIC11.93□□□□□ -0.5
Ebf3O08791 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Ebf3O08791 AC136376.2-201ENSMUST00000228819 490 ntBASIC11.93□□□□□ -0.5
Ebf3O08791 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
Ebf3O08791 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC11.93□□□□□ -0.5
Ebf3O08791 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Ebf3O08791 Gm5451-201ENSMUST00000080545 579 ntBASIC11.93□□□□□ -0.5
Ebf3O08791 Gm23680-201ENSMUST00000083162 164 ntBASIC11.93□□□□□ -0.5
Ebf3O08791 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ebf3O08791 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC11.93□□□□□ -0.5
Ebf3O08791 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC11.93□□□□□ -0.5
Ebf3O08791 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Ebf3O08791 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC11.93□□□□□ -0.5
Ebf3O08791 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC11.93□□□□□ -0.5
Ebf3O08791 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ebf3O08791 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Ebf3O08791 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ebf3O08791 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ebf3O08791 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ebf3O08791 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ebf3O08791 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ebf3O08791 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ebf3O08791 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ebf3O08791 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ebf3O08791 Gm43417-201ENSMUST00000201586 5207 ntBASIC11.92□□□□□ -0.5
Ebf3O08791 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ebf3O08791 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ebf3O08791 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ebf3O08791 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC11.92□□□□□ -0.5
Ebf3O08791 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ebf3O08791 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Ebf3O08791 Gm9192-201ENSMUST00000183221 985 ntBASIC11.92□□□□□ -0.5
Ebf3O08791 2610027F03Rik-202ENSMUST00000186982 603 ntTSL 5 BASIC11.92□□□□□ -0.5
Ebf3O08791 Gm5100-201ENSMUST00000195631 589 ntBASIC11.92□□□□□ -0.5
Ebf3O08791 4930405N21Rik-201ENSMUST00000199950 1200 ntBASIC11.92□□□□□ -0.5
Ebf3O08791 AC120394.2-201ENSMUST00000213905 702 ntTSL 5 BASIC11.92□□□□□ -0.5
Ebf3O08791 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Ebf3O08791 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ebf3O08791 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Ebf3O08791 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ebf3O08791 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ebf3O08791 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Ebf3O08791 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ebf3O08791 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC11.92□□□□□ -0.5
Ebf3O08791 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC11.92□□□□□ -0.5
Ebf3O08791 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ebf3O08791 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ebf3O08791 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ebf3O08791 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ebf3O08791 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ebf3O08791 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Ebf3O08791 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ebf3O08791 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ebf3O08791 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ebf3O08791 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ebf3O08791 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ebf3O08791 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ebf3O08791 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ebf3O08791 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ebf3O08791 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ebf3O08791 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC11.91□□□□□ -0.5
Ebf3O08791 Gm17230-201ENSMUST00000171194 3942 ntBASIC11.91□□□□□ -0.5
Ebf3O08791 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ebf3O08791 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ebf3O08791 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ebf3O08791 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ebf3O08791 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ebf3O08791 Gm25766-201ENSMUST00000104101 131 ntBASIC11.91□□□□□ -0.5
Ebf3O08791 n-R5s84-201ENSMUST00000122591 109 ntBASIC11.91□□□□□ -0.5
Ebf3O08791 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC11.91□□□□□ -0.5
Ebf3O08791 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC11.91□□□□□ -0.5
Ebf3O08791 Gm15507-201ENSMUST00000133523 592 ntTSL 5 BASIC11.91□□□□□ -0.5
Ebf3O08791 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC11.91□□□□□ -0.5
Ebf3O08791 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC11.91□□□□□ -0.5
Ebf3O08791 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ebf3O08791 Gm26047-201ENSMUST00000157308 113 ntBASIC11.91□□□□□ -0.5
Ebf3O08791 Gm23218-201ENSMUST00000158124 276 ntBASIC11.91□□□□□ -0.5
Ebf3O08791 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ebf3O08791 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC11.91□□□□□ -0.5
Ebf3O08791 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC11.91□□□□□ -0.5
Ebf3O08791 Gm29410-201ENSMUST00000188383 694 ntBASIC11.91□□□□□ -0.5
Ebf3O08791 Gm26047-202ENSMUST00000198840 115 ntBASIC11.91□□□□□ -0.5
Ebf3O08791 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC11.91□□□□□ -0.5
Ebf3O08791 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC11.91□□□□□ -0.5
Ebf3O08791 Rps18-ps3-201ENSMUST00000080443 456 ntBASIC11.91□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 64.6 ms