Protein–RNA interactions for Protein: O08712

Tnfrsf11b, Tumor necrosis factor receptor superfamily member 11B, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11bO08712 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tnfrsf11bO08712 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC11.6□□□□□ -0.55
Tnfrsf11bO08712 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC11.6□□□□□ -0.55
Tnfrsf11bO08712 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Tnfrsf11bO08712 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tnfrsf11bO08712 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
Tnfrsf11bO08712 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Tnfrsf11bO08712 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Tnfrsf11bO08712 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC11.6□□□□□ -0.55
Tnfrsf11bO08712 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Tnfrsf11bO08712 Plin2-201ENSMUST00000000466 1888 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Tnfrsf11bO08712 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Tnfrsf11bO08712 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Tnfrsf11bO08712 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Tnfrsf11bO08712 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Tnfrsf11bO08712 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Tnfrsf11bO08712 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Tnfrsf11bO08712 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Tnfrsf11bO08712 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Tnfrsf11bO08712 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Tnfrsf11bO08712 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Tnfrsf11bO08712 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC11.59□□□□□ -0.55
Tnfrsf11bO08712 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Tnfrsf11bO08712 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Tnfrsf11bO08712 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Tnfrsf11bO08712 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC11.59□□□□□ -0.55
Tnfrsf11bO08712 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Tnfrsf11bO08712 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC11.59□□□□□ -0.55
Tnfrsf11bO08712 Gm13263-201ENSMUST00000121271 838 ntBASIC11.59□□□□□ -0.55
Tnfrsf11bO08712 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC11.59□□□□□ -0.55
Tnfrsf11bO08712 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Tnfrsf11bO08712 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Tnfrsf11bO08712 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Tnfrsf11bO08712 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Tnfrsf11bO08712 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC11.59□□□□□ -0.55
Tnfrsf11bO08712 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC11.59□□□□□ -0.55
Tnfrsf11bO08712 AC122891.1-201ENSMUST00000218671 268 ntBASIC11.59□□□□□ -0.55
Tnfrsf11bO08712 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Tnfrsf11bO08712 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Tnfrsf11bO08712 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Tnfrsf11bO08712 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Tnfrsf11bO08712 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Tnfrsf11bO08712 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Tnfrsf11bO08712 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Tnfrsf11bO08712 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Tnfrsf11bO08712 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Tnfrsf11bO08712 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Tnfrsf11bO08712 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Tnfrsf11bO08712 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Tnfrsf11bO08712 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Tnfrsf11bO08712 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC11.59□□□□□ -0.55
Tnfrsf11bO08712 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Tnfrsf11bO08712 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Tnfrsf11bO08712 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
Tnfrsf11bO08712 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Tnfrsf11bO08712 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Tnfrsf11bO08712 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Tnfrsf11bO08712 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC11.58□□□□□ -0.55
Tnfrsf11bO08712 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Tnfrsf11bO08712 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Tnfrsf11bO08712 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Tnfrsf11bO08712 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Tnfrsf11bO08712 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Tnfrsf11bO08712 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Tnfrsf11bO08712 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Tnfrsf11bO08712 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Tnfrsf11bO08712 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Tnfrsf11bO08712 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
Tnfrsf11bO08712 Gm13916-201ENSMUST00000117368 628 ntBASIC11.58□□□□□ -0.56
Tnfrsf11bO08712 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Tnfrsf11bO08712 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC11.58□□□□□ -0.56
Tnfrsf11bO08712 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC11.58□□□□□ -0.56
Tnfrsf11bO08712 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Tnfrsf11bO08712 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Tnfrsf11bO08712 Gm9353-201ENSMUST00000200472 604 ntBASIC11.58□□□□□ -0.56
Tnfrsf11bO08712 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Tnfrsf11bO08712 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Tnfrsf11bO08712 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Tnfrsf11bO08712 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Tnfrsf11bO08712 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Tnfrsf11bO08712 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Tnfrsf11bO08712 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Tnfrsf11bO08712 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Tnfrsf11bO08712 H2-T24-201ENSMUST00000113760 2182 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
Tnfrsf11bO08712 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Tnfrsf11bO08712 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Tnfrsf11bO08712 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
Tnfrsf11bO08712 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
Tnfrsf11bO08712 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Tnfrsf11bO08712 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Tnfrsf11bO08712 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Tnfrsf11bO08712 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC11.57□□□□□ -0.56
Tnfrsf11bO08712 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Tnfrsf11bO08712 Gm38292-201ENSMUST00000192646 3045 ntBASIC11.57□□□□□ -0.56
Tnfrsf11bO08712 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC11.57□□□□□ -0.56
Tnfrsf11bO08712 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Tnfrsf11bO08712 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC11.57□□□□□ -0.56
Tnfrsf11bO08712 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Tnfrsf11bO08712 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Tnfrsf11bO08712 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms