Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Ccnb1-207ENSMUST00000174038 1182 ntTSL 5 BASIC13.82□□□□□ -0.2
NpcdF8VQB8 Gm9487-201ENSMUST00000216600 472 ntBASIC13.82□□□□□ -0.2
NpcdF8VQB8 Gm7525-201ENSMUST00000219425 454 ntBASIC13.82□□□□□ -0.2
NpcdF8VQB8 AC129975.1-201ENSMUST00000224816 592 ntBASIC13.82□□□□□ -0.2
NpcdF8VQB8 Mrpl33-201ENSMUST00000031024 478 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NpcdF8VQB8 Try5-201ENSMUST00000064324 801 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NpcdF8VQB8 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NpcdF8VQB8 Aven-202ENSMUST00000099588 791 ntAPPRIS ALT2 TSL 3 BASIC13.82□□□□□ -0.2
NpcdF8VQB8 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
NpcdF8VQB8 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
NpcdF8VQB8 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NpcdF8VQB8 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NpcdF8VQB8 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NpcdF8VQB8 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
NpcdF8VQB8 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC13.82□□□□□ -0.2
NpcdF8VQB8 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NpcdF8VQB8 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
NpcdF8VQB8 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC13.82□□□□□ -0.2
NpcdF8VQB8 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
NpcdF8VQB8 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
NpcdF8VQB8 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NpcdF8VQB8 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
NpcdF8VQB8 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NpcdF8VQB8 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC13.81□□□□□ -0.2
NpcdF8VQB8 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
NpcdF8VQB8 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NpcdF8VQB8 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC13.81□□□□□ -0.2
NpcdF8VQB8 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NpcdF8VQB8 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
NpcdF8VQB8 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NpcdF8VQB8 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
NpcdF8VQB8 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NpcdF8VQB8 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
NpcdF8VQB8 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
NpcdF8VQB8 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC13.81□□□□□ -0.2
NpcdF8VQB8 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
NpcdF8VQB8 Gm22937-201ENSMUST00000103954 131 ntBASIC13.81□□□□□ -0.2
NpcdF8VQB8 Styxl1-203ENSMUST00000111162 726 ntTSL 5 BASIC13.81□□□□□ -0.2
NpcdF8VQB8 Gm13286-201ENSMUST00000117750 537 ntBASIC13.81□□□□□ -0.2
NpcdF8VQB8 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC13.81□□□□□ -0.2
NpcdF8VQB8 Gm10631-201ENSMUST00000153288 494 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
NpcdF8VQB8 Gm6612-201ENSMUST00000170777 395 ntBASIC13.81□□□□□ -0.2
NpcdF8VQB8 4930578M01Rik-201ENSMUST00000180490 907 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
NpcdF8VQB8 Gm26976-201ENSMUST00000182929 908 ntBASIC13.81□□□□□ -0.2
NpcdF8VQB8 Cdk5-203ENSMUST00000198990 783 ntTSL 5 BASIC13.81□□□□□ -0.2
NpcdF8VQB8 Gm4903-201ENSMUST00000210462 405 ntBASIC13.81□□□□□ -0.2
NpcdF8VQB8 Pigx-212ENSMUST00000215073 765 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
NpcdF8VQB8 AC153961.1-201ENSMUST00000217760 385 ntBASIC13.81□□□□□ -0.2
NpcdF8VQB8 AC187103.3-201ENSMUST00000225725 646 ntBASIC13.81□□□□□ -0.2
NpcdF8VQB8 AC137871.1-201ENSMUST00000228278 475 ntBASIC13.81□□□□□ -0.2
NpcdF8VQB8 Izumo1r-202ENSMUST00000069408 1172 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
NpcdF8VQB8 Ctxn2-201ENSMUST00000099452 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NpcdF8VQB8 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
NpcdF8VQB8 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
NpcdF8VQB8 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NpcdF8VQB8 Gm6641-201ENSMUST00000196100 1315 ntBASIC13.81□□□□□ -0.2
NpcdF8VQB8 Rab3c-202ENSMUST00000223922 2398 ntBASIC13.81□□□□□ -0.2
NpcdF8VQB8 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
NpcdF8VQB8 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NpcdF8VQB8 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NpcdF8VQB8 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NpcdF8VQB8 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC13.81□□□□□ -0.2
NpcdF8VQB8 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NpcdF8VQB8 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NpcdF8VQB8 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NpcdF8VQB8 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NpcdF8VQB8 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
NpcdF8VQB8 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NpcdF8VQB8 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
NpcdF8VQB8 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
NpcdF8VQB8 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
NpcdF8VQB8 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NpcdF8VQB8 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
NpcdF8VQB8 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC13.8□□□□□ -0.2
NpcdF8VQB8 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NpcdF8VQB8 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
NpcdF8VQB8 Gm12389-201ENSMUST00000117696 418 ntBASIC13.8□□□□□ -0.2
NpcdF8VQB8 Gm11417-201ENSMUST00000150536 920 ntTSL 2 BASIC13.8□□□□□ -0.2
NpcdF8VQB8 4933417D19Rik-201ENSMUST00000181432 1229 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
NpcdF8VQB8 2310034O05Rik-201ENSMUST00000185221 1107 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
NpcdF8VQB8 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NpcdF8VQB8 Gm17825-201ENSMUST00000206836 794 ntBASIC13.8□□□□□ -0.2
NpcdF8VQB8 Gm45310-201ENSMUST00000210436 275 ntBASIC13.8□□□□□ -0.2
NpcdF8VQB8 Gm31513-201ENSMUST00000223261 684 ntTSL 2 BASIC13.8□□□□□ -0.2
NpcdF8VQB8 AC156790.2-201ENSMUST00000227115 568 ntBASIC13.8□□□□□ -0.2
NpcdF8VQB8 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NpcdF8VQB8 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NpcdF8VQB8 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC13.8□□□□□ -0.2
NpcdF8VQB8 Oprm1-222ENSMUST00000135502 1363 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
NpcdF8VQB8 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC13.8□□□□□ -0.2
NpcdF8VQB8 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
NpcdF8VQB8 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
NpcdF8VQB8 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
NpcdF8VQB8 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NpcdF8VQB8 Gm14005-210ENSMUST00000225087 1413 ntBASIC13.8□□□□□ -0.2
NpcdF8VQB8 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
NpcdF8VQB8 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NpcdF8VQB8 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NpcdF8VQB8 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
NpcdF8VQB8 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 57.3 ms