Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Exoc3l4-201ENSMUST00000072646 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdh9F8VPK8 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
Pcdh9F8VPK8 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdh9F8VPK8 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdh9F8VPK8 Gm15711-201ENSMUST00000118889 535 ntBASIC11.72□□□□□ -0.53
Pcdh9F8VPK8 Gm14017-201ENSMUST00000121934 386 ntBASIC11.72□□□□□ -0.53
Pcdh9F8VPK8 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC11.72□□□□□ -0.53
Pcdh9F8VPK8 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC11.72□□□□□ -0.53
Pcdh9F8VPK8 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC11.72□□□□□ -0.53
Pcdh9F8VPK8 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdh9F8VPK8 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC11.72□□□□□ -0.53
Pcdh9F8VPK8 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC11.72□□□□□ -0.53
Pcdh9F8VPK8 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC11.72□□□□□ -0.53
Pcdh9F8VPK8 Gm16505-201ENSMUST00000179981 232 ntBASIC11.72□□□□□ -0.53
Pcdh9F8VPK8 Gm18212-201ENSMUST00000211678 889 ntBASIC11.72□□□□□ -0.53
Pcdh9F8VPK8 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Pcdh9F8VPK8 AC151275.1-201ENSMUST00000224870 585 ntBASIC11.72□□□□□ -0.53
Pcdh9F8VPK8 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdh9F8VPK8 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdh9F8VPK8 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdh9F8VPK8 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdh9F8VPK8 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdh9F8VPK8 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdh9F8VPK8 AC159195.3-201ENSMUST00000225162 2211 ntBASIC11.72□□□□□ -0.53
Pcdh9F8VPK8 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdh9F8VPK8 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdh9F8VPK8 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdh9F8VPK8 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdh9F8VPK8 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdh9F8VPK8 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdh9F8VPK8 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdh9F8VPK8 Plin2-201ENSMUST00000000466 1888 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdh9F8VPK8 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdh9F8VPK8 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC11.72□□□□□ -0.53
Pcdh9F8VPK8 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdh9F8VPK8 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
Pcdh9F8VPK8 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Pcdh9F8VPK8 Gm6831-202ENSMUST00000213025 1673 ntBASIC11.71□□□□□ -0.53
Pcdh9F8VPK8 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
Pcdh9F8VPK8 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdh9F8VPK8 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdh9F8VPK8 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC11.71□□□□□ -0.53
Pcdh9F8VPK8 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdh9F8VPK8 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdh9F8VPK8 Gm13910-201ENSMUST00000121752 1428 ntBASIC11.71□□□□□ -0.53
Pcdh9F8VPK8 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdh9F8VPK8 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdh9F8VPK8 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdh9F8VPK8 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdh9F8VPK8 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdh9F8VPK8 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC11.71□□□□□ -0.53
Pcdh9F8VPK8 Gm14724-201ENSMUST00000118400 537 ntBASIC11.71□□□□□ -0.53
Pcdh9F8VPK8 Gm14208-201ENSMUST00000119645 678 ntBASIC11.71□□□□□ -0.53
Pcdh9F8VPK8 Gm2383-201ENSMUST00000181461 807 ntBASIC11.71□□□□□ -0.53
Pcdh9F8VPK8 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdh9F8VPK8 Gm27530-201ENSMUST00000184096 98 ntBASIC11.71□□□□□ -0.53
Pcdh9F8VPK8 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdh9F8VPK8 AC141438.2-201ENSMUST00000215068 271 ntBASIC11.71□□□□□ -0.53
Pcdh9F8VPK8 AC122891.1-201ENSMUST00000218671 268 ntBASIC11.71□□□□□ -0.53
Pcdh9F8VPK8 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC11.71□□□□□ -0.53
Pcdh9F8VPK8 CT573034.1-201ENSMUST00000222983 313 ntBASIC11.71□□□□□ -0.53
Pcdh9F8VPK8 CT030182.1-201ENSMUST00000225935 533 ntBASIC11.71□□□□□ -0.53
Pcdh9F8VPK8 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC11.71□□□□□ -0.54
Pcdh9F8VPK8 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Pcdh9F8VPK8 Nxpe5-204ENSMUST00000161047 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Pcdh9F8VPK8 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Pcdh9F8VPK8 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Pcdh9F8VPK8 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Pcdh9F8VPK8 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Pcdh9F8VPK8 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC11.71□□□□□ -0.54
Pcdh9F8VPK8 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Pcdh9F8VPK8 Gm6793-201ENSMUST00000071732 1604 ntAPPRIS P1 BASIC11.71□□□□□ -0.54
Pcdh9F8VPK8 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Pcdh9F8VPK8 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Pcdh9F8VPK8 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdh9F8VPK8 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdh9F8VPK8 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdh9F8VPK8 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdh9F8VPK8 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Pcdh9F8VPK8 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Pcdh9F8VPK8 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdh9F8VPK8 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC11.7□□□□□ -0.54
Pcdh9F8VPK8 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdh9F8VPK8 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdh9F8VPK8 Gm20755-201ENSMUST00000196893 1827 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdh9F8VPK8 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Pcdh9F8VPK8 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdh9F8VPK8 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdh9F8VPK8 Gm13812-201ENSMUST00000118061 1347 ntBASIC11.7□□□□□ -0.54
Pcdh9F8VPK8 Gm13810-201ENSMUST00000118584 1347 ntBASIC11.7□□□□□ -0.54
Pcdh9F8VPK8 Slc2a10-201ENSMUST00000029196 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdh9F8VPK8 AC127597.1-201ENSMUST00000225697 5711 ntBASIC11.7□□□□□ -0.54
Pcdh9F8VPK8 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdh9F8VPK8 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdh9F8VPK8 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdh9F8VPK8 Gm8459-201ENSMUST00000162504 760 ntBASIC11.7□□□□□ -0.54
Pcdh9F8VPK8 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
Pcdh9F8VPK8 Gm5342-201ENSMUST00000181982 1003 ntBASIC11.7□□□□□ -0.54
Pcdh9F8VPK8 Gm45575-201ENSMUST00000210283 548 ntBASIC11.7□□□□□ -0.54
Pcdh9F8VPK8 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC11.7□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 58.3 ms