Protein–RNA interactions for Protein: D3Z3K2

Ccnb1ip1, E3 ubiquitin-protein ligase CCNB1IP1, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccnb1ip1D3Z3K2 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Ccnb1ip1D3Z3K2 Syt14-201ENSMUST00000016344 1904 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Ccnb1ip1D3Z3K2 Fam161a-201ENSMUST00000058269 1927 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Ccnb1ip1D3Z3K2 Stk17b-201ENSMUST00000027263 3293 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Ccnb1ip1D3Z3K2 Sept9-205ENSMUST00000106354 3869 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
Ccnb1ip1D3Z3K2 Zkscan6-201ENSMUST00000018491 2302 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Ccnb1ip1D3Z3K2 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Ccnb1ip1D3Z3K2 Hacl1-212ENSMUST00000167066 1566 ntTSL 5 BASIC10.26□□□□□ -0.77
Ccnb1ip1D3Z3K2 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Ccnb1ip1D3Z3K2 Tsc22d3-201ENSMUST00000055738 1974 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ccnb1ip1D3Z3K2 Pabpc1l-201ENSMUST00000067715 2354 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ccnb1ip1D3Z3K2 Nr1i2-201ENSMUST00000023504 2553 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ccnb1ip1D3Z3K2 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ccnb1ip1D3Z3K2 Optc-205ENSMUST00000153617 1615 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Ccnb1ip1D3Z3K2 Rps24-210ENSMUST00000225023 1613 ntAPPRIS P4 BASIC10.26□□□□□ -0.77
Ccnb1ip1D3Z3K2 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC10.26□□□□□ -0.77
Ccnb1ip1D3Z3K2 Kif3c-201ENSMUST00000020999 6791 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ccnb1ip1D3Z3K2 8030423F21Rik-201ENSMUST00000064097 2851 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Ccnb1ip1D3Z3K2 Itgad-202ENSMUST00000106237 4105 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ccnb1ip1D3Z3K2 Atxn1l-201ENSMUST00000093162 7526 ntAPPRIS P1 TSL 2 BASIC10.26□□□□□ -0.77
Ccnb1ip1D3Z3K2 Fer1l5-202ENSMUST00000179162 6315 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ccnb1ip1D3Z3K2 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ccnb1ip1D3Z3K2 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC10.26□□□□□ -0.77
Ccnb1ip1D3Z3K2 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ccnb1ip1D3Z3K2 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ccnb1ip1D3Z3K2 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Ccnb1ip1D3Z3K2 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Ccnb1ip1D3Z3K2 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC10.26□□□□□ -0.77
Ccnb1ip1D3Z3K2 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC10.26□□□□□ -0.77
Ccnb1ip1D3Z3K2 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ccnb1ip1D3Z3K2 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Ccnb1ip1D3Z3K2 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Ccnb1ip1D3Z3K2 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Ccnb1ip1D3Z3K2 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Ccnb1ip1D3Z3K2 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Ccnb1ip1D3Z3K2 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC10.26□□□□□ -0.77
Ccnb1ip1D3Z3K2 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ccnb1ip1D3Z3K2 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ccnb1ip1D3Z3K2 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ccnb1ip1D3Z3K2 Plxnb3-201ENSMUST00000002079 6030 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Ccnb1ip1D3Z3K2 Trim36-202ENSMUST00000167364 4543 ntTSL 5 BASIC10.26□□□□□ -0.77
Ccnb1ip1D3Z3K2 Ints3-201ENSMUST00000029542 4337 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ccnb1ip1D3Z3K2 Erich3-202ENSMUST00000098496 8280 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Ccnb1ip1D3Z3K2 Cct8l1-201ENSMUST00000045016 1961 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
Ccnb1ip1D3Z3K2 Pxdn-208ENSMUST00000220271 6377 ntTSL 5 BASIC10.26□□□□□ -0.77
Ccnb1ip1D3Z3K2 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ccnb1ip1D3Z3K2 Nlgn1-205ENSMUST00000193603 11807 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ccnb1ip1D3Z3K2 Gm5847-201ENSMUST00000178959 1595 ntBASIC10.26□□□□□ -0.77
Ccnb1ip1D3Z3K2 AC108416.1-201ENSMUST00000228755 1558 ntBASIC10.26□□□□□ -0.77
Ccnb1ip1D3Z3K2 5730460C07Rik-201ENSMUST00000081193 1834 ntTSL 2 BASIC10.26□□□□□ -0.77
Ccnb1ip1D3Z3K2 Cacna2d1-204ENSMUST00000115281 3412 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Ccnb1ip1D3Z3K2 Cnot8-202ENSMUST00000108843 2099 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ccnb1ip1D3Z3K2 Vwf-203ENSMUST00000112254 8834 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Ccnb1ip1D3Z3K2 Actn2-201ENSMUST00000064204 3013 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Ccnb1ip1D3Z3K2 Polq-202ENSMUST00000071452 7290 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Ccnb1ip1D3Z3K2 Olfr6-203ENSMUST00000213651 4457 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Ccnb1ip1D3Z3K2 Camk2b-210ENSMUST00000109815 3780 ntAPPRIS P2 TSL 5 BASIC10.25□□□□□ -0.77
Ccnb1ip1D3Z3K2 Pax6-204ENSMUST00000111083 2370 ntAPPRIS ALT1 TSL 5 BASIC10.25□□□□□ -0.77
Ccnb1ip1D3Z3K2 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC10.25□□□□□ -0.77
Ccnb1ip1D3Z3K2 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Ccnb1ip1D3Z3K2 AA474408-201ENSMUST00000098110 3339 ntBASIC10.25□□□□□ -0.77
Ccnb1ip1D3Z3K2 Tubb5-201ENSMUST00000001566 2649 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Ccnb1ip1D3Z3K2 Gm33366-201ENSMUST00000195583 3827 ntBASIC10.25□□□□□ -0.77
Ccnb1ip1D3Z3K2 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Ccnb1ip1D3Z3K2 Acsl4-201ENSMUST00000033634 5280 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Ccnb1ip1D3Z3K2 Specc1-214ENSMUST00000202389 3363 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Ccnb1ip1D3Z3K2 Cd2bp2-203ENSMUST00000205316 2912 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Ccnb1ip1D3Z3K2 Sfxn5-201ENSMUST00000045846 3656 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Ccnb1ip1D3Z3K2 Gm5766-201ENSMUST00000160520 1977 ntBASIC10.25□□□□□ -0.77
Ccnb1ip1D3Z3K2 Sp100-201ENSMUST00000054279 1978 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Ccnb1ip1D3Z3K2 Gripap1-203ENSMUST00000115675 3015 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Ccnb1ip1D3Z3K2 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Ccnb1ip1D3Z3K2 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC10.25□□□□□ -0.77
Ccnb1ip1D3Z3K2 Gm9431-201ENSMUST00000119765 1051 ntBASIC10.25□□□□□ -0.77
Ccnb1ip1D3Z3K2 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC10.25□□□□□ -0.77
Ccnb1ip1D3Z3K2 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC10.25□□□□□ -0.77
Ccnb1ip1D3Z3K2 Gm12744-201ENSMUST00000146976 519 ntTSL 3 BASIC10.25□□□□□ -0.77
Ccnb1ip1D3Z3K2 Gm25226-201ENSMUST00000158198 123 ntBASIC10.25□□□□□ -0.77
Ccnb1ip1D3Z3K2 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Ccnb1ip1D3Z3K2 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Ccnb1ip1D3Z3K2 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC10.25□□□□□ -0.77
Ccnb1ip1D3Z3K2 Gm37201-201ENSMUST00000191845 523 ntBASIC10.25□□□□□ -0.77
Ccnb1ip1D3Z3K2 Gm37301-201ENSMUST00000195412 568 ntBASIC10.25□□□□□ -0.77
Ccnb1ip1D3Z3K2 Gm2756-201ENSMUST00000195851 400 ntBASIC10.25□□□□□ -0.77
Ccnb1ip1D3Z3K2 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC10.25□□□□□ -0.77
Ccnb1ip1D3Z3K2 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC10.25□□□□□ -0.77
Ccnb1ip1D3Z3K2 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Ccnb1ip1D3Z3K2 Gm19287-201ENSMUST00000203190 358 ntBASIC10.25□□□□□ -0.77
Ccnb1ip1D3Z3K2 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Ccnb1ip1D3Z3K2 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Ccnb1ip1D3Z3K2 AC155286.1-201ENSMUST00000218632 448 ntBASIC10.25□□□□□ -0.77
Ccnb1ip1D3Z3K2 AC154461.3-201ENSMUST00000224831 573 ntBASIC10.25□□□□□ -0.77
Ccnb1ip1D3Z3K2 AC022775.2-201ENSMUST00000227885 646 ntBASIC10.25□□□□□ -0.77
Ccnb1ip1D3Z3K2 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Ccnb1ip1D3Z3K2 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Ccnb1ip1D3Z3K2 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Ccnb1ip1D3Z3K2 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Ccnb1ip1D3Z3K2 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Ccnb1ip1D3Z3K2 Robo4-203ENSMUST00000115048 3392 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Ccnb1ip1D3Z3K2 Zfp384-201ENSMUST00000046064 3108 ntTSL 5 BASIC10.25□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 60.4 ms