Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Shank1D3YZU1 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Shank1D3YZU1 Cmya5-201ENSMUST00000062122 11850 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Shank1D3YZU1 Triml2-201ENSMUST00000163869 1467 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Shank1D3YZU1 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Shank1D3YZU1 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Shank1D3YZU1 Ssr1-203ENSMUST00000225246 1825 ntBASIC10.28□□□□□ -0.76
Shank1D3YZU1 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Shank1D3YZU1 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Shank1D3YZU1 Gm38344-201ENSMUST00000195306 1353 ntBASIC10.28□□□□□ -0.76
Shank1D3YZU1 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Shank1D3YZU1 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Shank1D3YZU1 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Shank1D3YZU1 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Shank1D3YZU1 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Shank1D3YZU1 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Shank1D3YZU1 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Shank1D3YZU1 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Shank1D3YZU1 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Shank1D3YZU1 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Shank1D3YZU1 Gm23612-201ENSMUST00000103823 110 ntBASIC10.28□□□□□ -0.76
Shank1D3YZU1 Gm12036-201ENSMUST00000120008 530 ntBASIC10.28□□□□□ -0.76
Shank1D3YZU1 Gm11269-201ENSMUST00000157011 595 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Shank1D3YZU1 Gm16240-201ENSMUST00000161924 614 ntTSL 2 BASIC10.28□□□□□ -0.76
Shank1D3YZU1 Pfdn5-203ENSMUST00000165671 830 ntTSL 2 BASIC10.28□□□□□ -0.76
Shank1D3YZU1 Gm23576-201ENSMUST00000179918 110 ntBASIC10.28□□□□□ -0.76
Shank1D3YZU1 Gm11942-201ENSMUST00000180255 345 ntBASIC10.28□□□□□ -0.76
Shank1D3YZU1 Gm43163-201ENSMUST00000196571 442 ntBASIC10.28□□□□□ -0.76
Shank1D3YZU1 Gm7192-201ENSMUST00000210793 1137 ntBASIC10.28□□□□□ -0.76
Shank1D3YZU1 Rpl3-201ENSMUST00000081650 1293 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Shank1D3YZU1 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC10.28□□□□□ -0.76
Shank1D3YZU1 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Shank1D3YZU1 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Shank1D3YZU1 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Shank1D3YZU1 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.76
Shank1D3YZU1 Cfap61-201ENSMUST00000116398 1561 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
Shank1D3YZU1 Gm44106-201ENSMUST00000203153 1599 ntBASIC10.27□□□□□ -0.76
Shank1D3YZU1 Specc1l-204ENSMUST00000218766 4725 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Shank1D3YZU1 Ccndbp1-202ENSMUST00000099488 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.76
Shank1D3YZU1 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
Shank1D3YZU1 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.76
Shank1D3YZU1 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Shank1D3YZU1 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.76
Shank1D3YZU1 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.76
Shank1D3YZU1 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.76
Shank1D3YZU1 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.76
Shank1D3YZU1 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
Shank1D3YZU1 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Shank1D3YZU1 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Shank1D3YZU1 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
Shank1D3YZU1 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Shank1D3YZU1 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Shank1D3YZU1 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Shank1D3YZU1 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Shank1D3YZU1 Gm15196-201ENSMUST00000121406 482 ntBASIC10.27□□□□□ -0.77
Shank1D3YZU1 Gm25569-201ENSMUST00000157175 131 ntBASIC10.27□□□□□ -0.77
Shank1D3YZU1 Gm25830-201ENSMUST00000158923 132 ntBASIC10.27□□□□□ -0.77
Shank1D3YZU1 Gm24328-201ENSMUST00000175104 67 ntBASIC10.27□□□□□ -0.77
Shank1D3YZU1 Scgb2b7-201ENSMUST00000178258 520 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Shank1D3YZU1 Gm6644-201ENSMUST00000186507 951 ntBASIC10.27□□□□□ -0.77
Shank1D3YZU1 A930036I15Rik-201ENSMUST00000196018 1045 ntBASIC10.27□□□□□ -0.77
Shank1D3YZU1 Pet100-203ENSMUST00000207389 363 ntTSL 2 BASIC10.27□□□□□ -0.77
Shank1D3YZU1 Gm9487-201ENSMUST00000216600 472 ntBASIC10.27□□□□□ -0.77
Shank1D3YZU1 Gm19046-201ENSMUST00000221263 1298 ntBASIC10.27□□□□□ -0.77
Shank1D3YZU1 Fth1-201ENSMUST00000025563 866 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Shank1D3YZU1 Acot13-201ENSMUST00000006900 721 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Shank1D3YZU1 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC10.27□□□□□ -0.77
Shank1D3YZU1 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Shank1D3YZU1 Gm2721-201ENSMUST00000222380 1571 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Shank1D3YZU1 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC10.27□□□□□ -0.77
Shank1D3YZU1 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC10.27□□□□□ -0.77
Shank1D3YZU1 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Shank1D3YZU1 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
Shank1D3YZU1 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Shank1D3YZU1 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC10.27□□□□□ -0.77
Shank1D3YZU1 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
Shank1D3YZU1 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Shank1D3YZU1 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Shank1D3YZU1 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Shank1D3YZU1 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Shank1D3YZU1 Platr19-201ENSMUST00000171380 1466 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Shank1D3YZU1 Slc13a5-206ENSMUST00000208912 1751 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
Shank1D3YZU1 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Shank1D3YZU1 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Shank1D3YZU1 Styx-205ENSMUST00000226873 12974 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
Shank1D3YZU1 Gm15911-201ENSMUST00000138992 809 ntTSL 3 BASIC10.26□□□□□ -0.77
Shank1D3YZU1 Nmbr-207ENSMUST00000190751 921 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Shank1D3YZU1 Gm30946-201ENSMUST00000198288 724 ntBASIC10.26□□□□□ -0.77
Shank1D3YZU1 Gm42748-201ENSMUST00000199354 2341 ntBASIC10.26□□□□□ -0.77
Shank1D3YZU1 Gm30731-201ENSMUST00000203909 825 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Shank1D3YZU1 Gm45527-201ENSMUST00000211052 774 ntBASIC10.26□□□□□ -0.77
Shank1D3YZU1 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Shank1D3YZU1 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC10.26□□□□□ -0.77
Shank1D3YZU1 AC164087.2-201ENSMUST00000216206 1072 ntBASIC10.26□□□□□ -0.77
Shank1D3YZU1 Akr1c18-201ENSMUST00000021635 1200 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Shank1D3YZU1 Nkain2-205ENSMUST00000219125 1166 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Shank1D3YZU1 Timm9-210ENSMUST00000221892 734 ntTSL 5 BASIC10.26□□□□□ -0.77
Shank1D3YZU1 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC10.26□□□□□ -0.77
Shank1D3YZU1 Capsl-202ENSMUST00000226688 739 ntBASIC10.26□□□□□ -0.77
Shank1D3YZU1 Ebi3-201ENSMUST00000003274 1170 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms