Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
H2afb2S4R1M3 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
H2afb2S4R1M3 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
H2afb2S4R1M3 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
H2afb2S4R1M3 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
H2afb2S4R1M3 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
H2afb2S4R1M3 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
H2afb2S4R1M3 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
H2afb2S4R1M3 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
H2afb2S4R1M3 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
H2afb2S4R1M3 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC11.44□□□□□ -0.58
H2afb2S4R1M3 Gm21939-201ENSMUST00000221137 2773 ntBASIC11.44□□□□□ -0.58
H2afb2S4R1M3 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
H2afb2S4R1M3 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
H2afb2S4R1M3 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
H2afb2S4R1M3 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC11.44□□□□□ -0.58
H2afb2S4R1M3 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC11.44□□□□□ -0.58
H2afb2S4R1M3 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
H2afb2S4R1M3 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
H2afb2S4R1M3 Gm29199-201ENSMUST00000187766 775 ntBASIC11.44□□□□□ -0.58
H2afb2S4R1M3 Gm9540-201ENSMUST00000188230 478 ntBASIC11.44□□□□□ -0.58
H2afb2S4R1M3 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC11.44□□□□□ -0.58
H2afb2S4R1M3 Gm7848-201ENSMUST00000210739 718 ntBASIC11.44□□□□□ -0.58
H2afb2S4R1M3 Gm5363-201ENSMUST00000211927 938 ntBASIC11.44□□□□□ -0.58
H2afb2S4R1M3 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC11.44□□□□□ -0.58
H2afb2S4R1M3 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
H2afb2S4R1M3 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
H2afb2S4R1M3 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
H2afb2S4R1M3 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
H2afb2S4R1M3 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
H2afb2S4R1M3 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
H2afb2S4R1M3 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
H2afb2S4R1M3 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC11.44□□□□□ -0.58
H2afb2S4R1M3 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
H2afb2S4R1M3 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC11.44□□□□□ -0.58
H2afb2S4R1M3 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC11.44□□□□□ -0.58
H2afb2S4R1M3 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
H2afb2S4R1M3 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
H2afb2S4R1M3 Gm45416-201ENSMUST00000209713 2201 ntBASIC11.44□□□□□ -0.58
H2afb2S4R1M3 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC11.44□□□□□ -0.58
H2afb2S4R1M3 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
H2afb2S4R1M3 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
H2afb2S4R1M3 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
H2afb2S4R1M3 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
H2afb2S4R1M3 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
H2afb2S4R1M3 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
H2afb2S4R1M3 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
H2afb2S4R1M3 Gm44663-201ENSMUST00000206898 3150 ntBASIC11.43□□□□□ -0.58
H2afb2S4R1M3 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
H2afb2S4R1M3 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
H2afb2S4R1M3 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
H2afb2S4R1M3 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC11.43□□□□□ -0.58
H2afb2S4R1M3 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
H2afb2S4R1M3 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
H2afb2S4R1M3 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
H2afb2S4R1M3 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC11.43□□□□□ -0.58
H2afb2S4R1M3 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
H2afb2S4R1M3 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC11.43□□□□□ -0.58
H2afb2S4R1M3 Gm12247-201ENSMUST00000117585 670 ntBASIC11.43□□□□□ -0.58
H2afb2S4R1M3 Gm15595-201ENSMUST00000120840 961 ntBASIC11.43□□□□□ -0.58
H2afb2S4R1M3 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
H2afb2S4R1M3 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC11.43□□□□□ -0.58
H2afb2S4R1M3 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC11.43□□□□□ -0.58
H2afb2S4R1M3 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
H2afb2S4R1M3 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC11.43□□□□□ -0.58
H2afb2S4R1M3 Gm12407-201ENSMUST00000180219 324 ntBASIC11.43□□□□□ -0.58
H2afb2S4R1M3 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
H2afb2S4R1M3 Gm5732-201ENSMUST00000182596 1007 ntBASIC11.43□□□□□ -0.58
H2afb2S4R1M3 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
H2afb2S4R1M3 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
H2afb2S4R1M3 Gm37246-201ENSMUST00000192665 835 ntBASIC11.43□□□□□ -0.58
H2afb2S4R1M3 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
H2afb2S4R1M3 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
H2afb2S4R1M3 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
H2afb2S4R1M3 Gm6722-201ENSMUST00000221586 390 ntBASIC11.43□□□□□ -0.58
H2afb2S4R1M3 CT009713.8-201ENSMUST00000225448 560 ntBASIC11.43□□□□□ -0.58
H2afb2S4R1M3 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC11.43□□□□□ -0.58
H2afb2S4R1M3 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC11.43□□□□□ -0.58
H2afb2S4R1M3 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
H2afb2S4R1M3 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
H2afb2S4R1M3 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
H2afb2S4R1M3 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
H2afb2S4R1M3 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
H2afb2S4R1M3 Gm40377-201ENSMUST00000204604 2015 ntBASIC11.43□□□□□ -0.58
H2afb2S4R1M3 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
H2afb2S4R1M3 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
H2afb2S4R1M3 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
H2afb2S4R1M3 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
H2afb2S4R1M3 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC11.43□□□□□ -0.58
H2afb2S4R1M3 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
H2afb2S4R1M3 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
H2afb2S4R1M3 Gm6903-201ENSMUST00000160509 1366 ntBASIC11.42□□□□□ -0.58
H2afb2S4R1M3 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
H2afb2S4R1M3 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
H2afb2S4R1M3 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
H2afb2S4R1M3 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
H2afb2S4R1M3 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
H2afb2S4R1M3 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
H2afb2S4R1M3 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
H2afb2S4R1M3 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms