Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Acmsd-201ENSMUST00000038006 2717 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Smco4Q9JIS3 Ralgps1-202ENSMUST00000091039 2738 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Smco4Q9JIS3 Tmem74bos-202ENSMUST00000149319 2090 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Smco4Q9JIS3 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Smco4Q9JIS3 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
Smco4Q9JIS3 Gm14441-201ENSMUST00000121960 540 ntBASIC9.1□□□□□ -0.95
Smco4Q9JIS3 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC9.1□□□□□ -0.95
Smco4Q9JIS3 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC9.1□□□□□ -0.95
Smco4Q9JIS3 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Smco4Q9JIS3 Gm15943-201ENSMUST00000147638 3821 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Smco4Q9JIS3 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
Smco4Q9JIS3 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Smco4Q9JIS3 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Smco4Q9JIS3 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
Smco4Q9JIS3 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
Smco4Q9JIS3 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC9.1□□□□□ -0.95
Smco4Q9JIS3 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Smco4Q9JIS3 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC9.1□□□□□ -0.95
Smco4Q9JIS3 Gm44772-201ENSMUST00000207623 1191 ntBASIC9.1□□□□□ -0.95
Smco4Q9JIS3 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC9.1□□□□□ -0.95
Smco4Q9JIS3 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC9.1□□□□□ -0.95
Smco4Q9JIS3 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Smco4Q9JIS3 AC156501.1-201ENSMUST00000228219 270 ntBASIC9.1□□□□□ -0.95
Smco4Q9JIS3 AC135114.1-201ENSMUST00000228682 270 ntBASIC9.1□□□□□ -0.95
Smco4Q9JIS3 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Smco4Q9JIS3 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Smco4Q9JIS3 Tsga8-201ENSMUST00000049420 1070 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Smco4Q9JIS3 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Smco4Q9JIS3 Rrp8-202ENSMUST00000098148 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Smco4Q9JIS3 Prkx-201ENSMUST00000036333 4146 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Smco4Q9JIS3 Kctd7-201ENSMUST00000040616 4291 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Smco4Q9JIS3 Mthfr-202ENSMUST00000097788 2652 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
Smco4Q9JIS3 Myadm-201ENSMUST00000096744 2814 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Smco4Q9JIS3 Gm37660-201ENSMUST00000192754 1732 ntBASIC9.1□□□□□ -0.95
Smco4Q9JIS3 Il12rb2-201ENSMUST00000018485 2998 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Smco4Q9JIS3 Gpr35-203ENSMUST00000169198 4214 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Smco4Q9JIS3 N4bp2l1-205ENSMUST00000202031 1864 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Smco4Q9JIS3 Gm26780-201ENSMUST00000180748 2495 ntTSL 5 BASIC9.1□□□□□ -0.95
Smco4Q9JIS3 Ctnnd1-206ENSMUST00000111675 5089 ntTSL 5 BASIC9.1□□□□□ -0.95
Smco4Q9JIS3 Fam222b-203ENSMUST00000155571 3358 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Smco4Q9JIS3 Ywhag-201ENSMUST00000055808 3520 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Smco4Q9JIS3 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC9.1□□□□□ -0.95
Smco4Q9JIS3 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Smco4Q9JIS3 Apobec3-204ENSMUST00000175714 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Smco4Q9JIS3 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Smco4Q9JIS3 Nek5-201ENSMUST00000169834 2404 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
Smco4Q9JIS3 Firre-206ENSMUST00000203933 5555 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Smco4Q9JIS3 Stk36-201ENSMUST00000087183 5245 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
Smco4Q9JIS3 Pex26-203ENSMUST00000120066 3861 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Smco4Q9JIS3 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Smco4Q9JIS3 Habp2-202ENSMUST00000095948 2815 ntAPPRIS P2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Smco4Q9JIS3 Upk1b-201ENSMUST00000057767 1769 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Smco4Q9JIS3 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
Smco4Q9JIS3 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC9.09□□□□□ -0.95
Smco4Q9JIS3 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC9.09□□□□□ -0.95
Smco4Q9JIS3 AC154767.3-201ENSMUST00000225150 1342 ntBASIC9.09□□□□□ -0.95
Smco4Q9JIS3 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Smco4Q9JIS3 Dgkh-201ENSMUST00000074729 3967 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
Smco4Q9JIS3 Atcayos-203ENSMUST00000150782 3057 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Smco4Q9JIS3 Tmco4-201ENSMUST00000043042 2922 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Smco4Q9JIS3 Kcnv1-201ENSMUST00000022967 4389 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Smco4Q9JIS3 Gm10634-202ENSMUST00000188891 2464 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Smco4Q9JIS3 Nkx2-2os-201ENSMUST00000136998 4345 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Smco4Q9JIS3 Fcamr-201ENSMUST00000027670 1743 ntAPPRIS P3 TSL 1 (best) BASIC9.09□□□□□ -0.95
Smco4Q9JIS3 Zfp943-201ENSMUST00000055349 2741 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Smco4Q9JIS3 Gm10643-201ENSMUST00000098592 1577 ntAPPRIS P1 BASIC9.09□□□□□ -0.95
Smco4Q9JIS3 Ncam1-201ENSMUST00000114476 2567 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Smco4Q9JIS3 Gm1627-201ENSMUST00000188504 2588 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Smco4Q9JIS3 Gphn-201ENSMUST00000052472 3570 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Smco4Q9JIS3 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
Smco4Q9JIS3 Gm37582-201ENSMUST00000192953 1409 ntBASIC9.09□□□□□ -0.95
Smco4Q9JIS3 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Smco4Q9JIS3 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Smco4Q9JIS3 Gm13453-201ENSMUST00000118708 357 ntBASIC9.09□□□□□ -0.95
Smco4Q9JIS3 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Smco4Q9JIS3 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC9.09□□□□□ -0.95
Smco4Q9JIS3 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Smco4Q9JIS3 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC9.09□□□□□ -0.95
Smco4Q9JIS3 Gm25911-201ENSMUST00000157621 56 ntBASIC9.09□□□□□ -0.95
Smco4Q9JIS3 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Smco4Q9JIS3 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC9.09□□□□□ -0.95
Smco4Q9JIS3 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC9.09□□□□□ -0.95
Smco4Q9JIS3 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC9.09□□□□□ -0.95
Smco4Q9JIS3 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC9.09□□□□□ -0.95
Smco4Q9JIS3 Gm44397-201ENSMUST00000195950 113 ntBASIC9.09□□□□□ -0.95
Smco4Q9JIS3 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC9.09□□□□□ -0.95
Smco4Q9JIS3 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Smco4Q9JIS3 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Smco4Q9JIS3 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC9.09□□□□□ -0.95
Smco4Q9JIS3 Gm26673-201ENSMUST00000181126 3377 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Smco4Q9JIS3 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Smco4Q9JIS3 Syne1-201ENSMUST00000041639 6990 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Smco4Q9JIS3 Kif2b-201ENSMUST00000061019 2244 ntAPPRIS P1 BASIC9.09□□□□□ -0.95
Smco4Q9JIS3 Cep112-201ENSMUST00000061287 3485 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
Smco4Q9JIS3 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Smco4Q9JIS3 Zzef1-208ENSMUST00000207107 11306 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
Smco4Q9JIS3 Ogdh-204ENSMUST00000101554 4106 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Smco4Q9JIS3 Mical1-203ENSMUST00000119962 3565 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
Smco4Q9JIS3 Mical1-201ENSMUST00000019967 3563 ntAPPRIS P2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Smco4Q9JIS3 Gm45342-201ENSMUST00000210903 1363 ntBASIC9.09□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 155.8 ms