Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Gm9540-201ENSMUST00000188230 478 ntBASIC11.95□□□□□ -0.5
Chmp2aQ9DB34 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC11.95□□□□□ -0.5
Chmp2aQ9DB34 Gm6108-201ENSMUST00000208365 367 ntBASIC11.95□□□□□ -0.5
Chmp2aQ9DB34 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Chmp2aQ9DB34 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Chmp2aQ9DB34 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC11.95□□□□□ -0.5
Chmp2aQ9DB34 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Chmp2aQ9DB34 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Chmp2aQ9DB34 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Chmp2aQ9DB34 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Chmp2aQ9DB34 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Chmp2aQ9DB34 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Chmp2aQ9DB34 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Chmp2aQ9DB34 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Chmp2aQ9DB34 Myo7a-201ENSMUST00000084979 6849 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Chmp2aQ9DB34 Nf1-202ENSMUST00000108251 9217 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Chmp2aQ9DB34 Cbfa2t2-204ENSMUST00000109725 6080 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Chmp2aQ9DB34 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Chmp2aQ9DB34 Stc2-201ENSMUST00000020546 3940 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Chmp2aQ9DB34 CT009489.1-201ENSMUST00000227740 1893 ntBASIC11.95□□□□□ -0.5
Chmp2aQ9DB34 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC11.95□□□□□ -0.5
Chmp2aQ9DB34 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Chmp2aQ9DB34 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Chmp2aQ9DB34 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Chmp2aQ9DB34 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Chmp2aQ9DB34 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Chmp2aQ9DB34 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Chmp2aQ9DB34 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Chmp2aQ9DB34 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Chmp2aQ9DB34 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC11.95□□□□□ -0.5
Chmp2aQ9DB34 Gm44573-201ENSMUST00000191753 2370 ntBASIC11.94□□□□□ -0.5
Chmp2aQ9DB34 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Chmp2aQ9DB34 Jade1-201ENSMUST00000026865 5481 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Chmp2aQ9DB34 Phf8-211ENSMUST00000168501 6359 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Chmp2aQ9DB34 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Chmp2aQ9DB34 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Chmp2aQ9DB34 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Chmp2aQ9DB34 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Chmp2aQ9DB34 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Chmp2aQ9DB34 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Chmp2aQ9DB34 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Chmp2aQ9DB34 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Chmp2aQ9DB34 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC11.94□□□□□ -0.5
Chmp2aQ9DB34 Plcd4-205ENSMUST00000113749 4648 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Chmp2aQ9DB34 Gm42706-201ENSMUST00000199733 1910 ntBASIC11.94□□□□□ -0.5
Chmp2aQ9DB34 Manea-201ENSMUST00000041374 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Chmp2aQ9DB34 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Chmp2aQ9DB34 Gm21986-201ENSMUST00000113671 5560 ntTSL 2 BASIC11.94□□□□□ -0.5
Chmp2aQ9DB34 Gm14193-201ENSMUST00000105067 153 ntBASIC11.94□□□□□ -0.5
Chmp2aQ9DB34 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Chmp2aQ9DB34 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Chmp2aQ9DB34 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC11.94□□□□□ -0.5
Chmp2aQ9DB34 Gm13408-201ENSMUST00000119822 798 ntBASIC11.94□□□□□ -0.5
Chmp2aQ9DB34 Gm13935-201ENSMUST00000121859 798 ntBASIC11.94□□□□□ -0.5
Chmp2aQ9DB34 Gm24844-201ENSMUST00000158679 127 ntBASIC11.94□□□□□ -0.5
Chmp2aQ9DB34 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Chmp2aQ9DB34 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC11.94□□□□□ -0.5
Chmp2aQ9DB34 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Chmp2aQ9DB34 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Chmp2aQ9DB34 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Chmp2aQ9DB34 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Chmp2aQ9DB34 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC11.94□□□□□ -0.5
Chmp2aQ9DB34 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC11.94□□□□□ -0.5
Chmp2aQ9DB34 Gm45118-201ENSMUST00000208928 825 ntBASIC11.94□□□□□ -0.5
Chmp2aQ9DB34 Gm8959-201ENSMUST00000213150 571 ntBASIC11.94□□□□□ -0.5
Chmp2aQ9DB34 AC122408.1-201ENSMUST00000218949 218 ntBASIC11.94□□□□□ -0.5
Chmp2aQ9DB34 Gm18065-201ENSMUST00000221395 526 ntBASIC11.94□□□□□ -0.5
Chmp2aQ9DB34 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Chmp2aQ9DB34 Gpr101-201ENSMUST00000057645 5410 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Chmp2aQ9DB34 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Chmp2aQ9DB34 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Chmp2aQ9DB34 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC11.94□□□□□ -0.5
Chmp2aQ9DB34 Slc45a4-202ENSMUST00000076224 4240 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Chmp2aQ9DB34 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC11.94□□□□□ -0.5
Chmp2aQ9DB34 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Chmp2aQ9DB34 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Chmp2aQ9DB34 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Chmp2aQ9DB34 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Chmp2aQ9DB34 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
Chmp2aQ9DB34 Fbxo43-201ENSMUST00000058643 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Chmp2aQ9DB34 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Chmp2aQ9DB34 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Chmp2aQ9DB34 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC11.94□□□□□ -0.5
Chmp2aQ9DB34 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Chmp2aQ9DB34 Bcl9l-203ENSMUST00000218183 6771 ntAPPRIS P2 TSL 5 BASIC11.94□□□□□ -0.5
Chmp2aQ9DB34 Emc1-201ENSMUST00000042096 4706 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Chmp2aQ9DB34 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Chmp2aQ9DB34 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Chmp2aQ9DB34 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Chmp2aQ9DB34 Gm43081-201ENSMUST00000199082 1380 ntBASIC11.93□□□□□ -0.5
Chmp2aQ9DB34 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Chmp2aQ9DB34 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Chmp2aQ9DB34 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Chmp2aQ9DB34 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Chmp2aQ9DB34 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Chmp2aQ9DB34 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC11.93□□□□□ -0.5
Chmp2aQ9DB34 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Chmp2aQ9DB34 AC166836.1-201ENSMUST00000219933 1795 ntBASIC11.93□□□□□ -0.5
Chmp2aQ9DB34 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Chmp2aQ9DB34 Gm22920-201ENSMUST00000102175 109 ntBASIC11.93□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms