Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC15.05■□□□□ 0
U2af1Q9D883 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
U2af1Q9D883 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
U2af1Q9D883 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
U2af1Q9D883 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC15.05■□□□□ -0
U2af1Q9D883 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC15.05■□□□□ -0
U2af1Q9D883 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC15.05■□□□□ -0
U2af1Q9D883 Olfml3-204ENSMUST00000169286 874 ntBASIC15.05■□□□□ -0
U2af1Q9D883 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
U2af1Q9D883 Gm33201-201ENSMUST00000204791 855 ntTSL 3 BASIC15.05■□□□□ -0
U2af1Q9D883 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
U2af1Q9D883 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
U2af1Q9D883 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC15.05■□□□□ -0
U2af1Q9D883 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC15.05■□□□□ -0
U2af1Q9D883 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC15.05■□□□□ -0
U2af1Q9D883 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC15.05■□□□□ -0
U2af1Q9D883 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
U2af1Q9D883 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
U2af1Q9D883 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
U2af1Q9D883 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
U2af1Q9D883 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
U2af1Q9D883 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
U2af1Q9D883 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
U2af1Q9D883 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
U2af1Q9D883 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
U2af1Q9D883 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
U2af1Q9D883 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
U2af1Q9D883 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
U2af1Q9D883 AC164107.1-201ENSMUST00000227730 2161 ntBASIC15.04■□□□□ -0
U2af1Q9D883 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
U2af1Q9D883 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
U2af1Q9D883 Gm5171-201ENSMUST00000214944 1415 ntBASIC15.04■□□□□ -0
U2af1Q9D883 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
U2af1Q9D883 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC15.04■□□□□ -0
U2af1Q9D883 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC15.04■□□□□ -0
U2af1Q9D883 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC15.04■□□□□ -0
U2af1Q9D883 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC15.04■□□□□ -0
U2af1Q9D883 AC122891.1-201ENSMUST00000218671 268 ntBASIC15.04■□□□□ -0
U2af1Q9D883 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
U2af1Q9D883 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC15.04■□□□□ -0
U2af1Q9D883 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
U2af1Q9D883 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
U2af1Q9D883 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC15.04■□□□□ -0
U2af1Q9D883 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
U2af1Q9D883 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC15.04■□□□□ -0
U2af1Q9D883 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
U2af1Q9D883 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
U2af1Q9D883 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
U2af1Q9D883 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC15.04■□□□□ -0
U2af1Q9D883 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC15.03■□□□□ -0
U2af1Q9D883 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
U2af1Q9D883 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
U2af1Q9D883 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
U2af1Q9D883 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC15.03■□□□□ -0
U2af1Q9D883 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
U2af1Q9D883 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC15.03■□□□□ -0
U2af1Q9D883 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
U2af1Q9D883 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
U2af1Q9D883 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC15.03■□□□□ -0
U2af1Q9D883 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
U2af1Q9D883 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
U2af1Q9D883 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
U2af1Q9D883 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC15.03■□□□□ -0
U2af1Q9D883 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
U2af1Q9D883 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
U2af1Q9D883 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC15.03■□□□□ -0
U2af1Q9D883 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC15.03■□□□□ -0
U2af1Q9D883 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
U2af1Q9D883 Gm13422-201ENSMUST00000118834 504 ntBASIC15.03■□□□□ -0
U2af1Q9D883 Gm12899-201ENSMUST00000120565 551 ntBASIC15.03■□□□□ -0
U2af1Q9D883 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC15.03■□□□□ -0
U2af1Q9D883 Gm21778-201ENSMUST00000178779 471 ntBASIC15.03■□□□□ -0
U2af1Q9D883 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC15.03■□□□□ -0
U2af1Q9D883 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
U2af1Q9D883 Gm17877-201ENSMUST00000192578 814 ntBASIC15.03■□□□□ -0
U2af1Q9D883 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC15.03■□□□□ -0
U2af1Q9D883 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC15.03■□□□□ -0
U2af1Q9D883 Gm19046-201ENSMUST00000221263 1298 ntBASIC15.03■□□□□ -0
U2af1Q9D883 CT025602.2-201ENSMUST00000226553 772 ntBASIC15.03■□□□□ -0
U2af1Q9D883 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
U2af1Q9D883 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
U2af1Q9D883 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
U2af1Q9D883 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
U2af1Q9D883 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC15.03■□□□□ -0
U2af1Q9D883 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC15.03■□□□□ -0
U2af1Q9D883 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC15.03■□□□□ -0
U2af1Q9D883 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
U2af1Q9D883 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
U2af1Q9D883 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
U2af1Q9D883 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
U2af1Q9D883 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
U2af1Q9D883 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
U2af1Q9D883 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC15.02■□□□□ -0
U2af1Q9D883 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
U2af1Q9D883 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
U2af1Q9D883 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC15.02■□□□□ -0
U2af1Q9D883 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC15.02■□□□□ -0
U2af1Q9D883 Gm13384-201ENSMUST00000117166 1344 ntBASIC15.02■□□□□ -0
U2af1Q9D883 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
U2af1Q9D883 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms