Protein–RNA interactions for Protein: Q9D439

Cfap53, Cilia- and flagella-associated protein 53, mousemouse

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap53Q9D439 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cfap53Q9D439 Tom1l2-206ENSMUST00000102683 4999 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cfap53Q9D439 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cfap53Q9D439 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Cfap53Q9D439 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cfap53Q9D439 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cfap53Q9D439 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC12.6□□□□□ -0.39
Cfap53Q9D439 Gm14071-201ENSMUST00000117817 509 ntBASIC12.6□□□□□ -0.39
Cfap53Q9D439 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cfap53Q9D439 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC12.6□□□□□ -0.39
Cfap53Q9D439 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC12.6□□□□□ -0.39
Cfap53Q9D439 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Cfap53Q9D439 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
Cfap53Q9D439 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cfap53Q9D439 Mir6927-201ENSMUST00000184494 71 ntBASIC12.6□□□□□ -0.39
Cfap53Q9D439 Gm29499-201ENSMUST00000189151 486 ntBASIC12.6□□□□□ -0.39
Cfap53Q9D439 Gm28329-201ENSMUST00000191208 689 ntBASIC12.6□□□□□ -0.39
Cfap53Q9D439 Gm29171-201ENSMUST00000191397 486 ntBASIC12.6□□□□□ -0.39
Cfap53Q9D439 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cfap53Q9D439 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC12.6□□□□□ -0.39
Cfap53Q9D439 Gm42682-201ENSMUST00000198349 1265 ntBASIC12.6□□□□□ -0.39
Cfap53Q9D439 Gm6905-201ENSMUST00000205729 511 ntBASIC12.6□□□□□ -0.39
Cfap53Q9D439 Gm6867-201ENSMUST00000219165 425 ntBASIC12.6□□□□□ -0.39
Cfap53Q9D439 Mir219a-1-201ENSMUST00000083621 110 ntBASIC12.6□□□□□ -0.39
Cfap53Q9D439 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC12.6□□□□□ -0.39
Cfap53Q9D439 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cfap53Q9D439 Gpr146-203ENSMUST00000100514 4264 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cfap53Q9D439 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cfap53Q9D439 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cfap53Q9D439 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cfap53Q9D439 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cfap53Q9D439 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cfap53Q9D439 Tln2-205ENSMUST00000215267 4999 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cfap53Q9D439 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cfap53Q9D439 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cfap53Q9D439 Akap12-202ENSMUST00000215696 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cfap53Q9D439 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cfap53Q9D439 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cfap53Q9D439 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cfap53Q9D439 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cfap53Q9D439 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cfap53Q9D439 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cfap53Q9D439 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cfap53Q9D439 Arid2-201ENSMUST00000096250 8507 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Cfap53Q9D439 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cfap53Q9D439 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC12.59□□□□□ -0.39
Cfap53Q9D439 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cfap53Q9D439 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cfap53Q9D439 Gm23200-201ENSMUST00000104379 132 ntBASIC12.59□□□□□ -0.39
Cfap53Q9D439 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC12.59□□□□□ -0.39
Cfap53Q9D439 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Cfap53Q9D439 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Cfap53Q9D439 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC12.59□□□□□ -0.39
Cfap53Q9D439 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC12.59□□□□□ -0.39
Cfap53Q9D439 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cfap53Q9D439 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC12.59□□□□□ -0.39
Cfap53Q9D439 AC112945.1-201ENSMUST00000226413 514 ntBASIC12.59□□□□□ -0.39
Cfap53Q9D439 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Cfap53Q9D439 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cfap53Q9D439 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cfap53Q9D439 Ntng1-201ENSMUST00000051253 327 ntBASIC12.59□□□□□ -0.39
Cfap53Q9D439 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
Cfap53Q9D439 Enam-201ENSMUST00000031222 5483 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cfap53Q9D439 Pcdh10-202ENSMUST00000170695 8234 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cfap53Q9D439 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cfap53Q9D439 Mtf1-202ENSMUST00000106193 7554 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Cfap53Q9D439 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cfap53Q9D439 Steap3-203ENSMUST00000112641 5158 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cfap53Q9D439 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cfap53Q9D439 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC12.59□□□□□ -0.39
Cfap53Q9D439 AC154537.1-201ENSMUST00000226101 1304 ntBASIC12.59□□□□□ -0.39
Cfap53Q9D439 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cfap53Q9D439 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cfap53Q9D439 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cfap53Q9D439 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cfap53Q9D439 Ly75-201ENSMUST00000028362 5172 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Cfap53Q9D439 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Cfap53Q9D439 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cfap53Q9D439 Tnxb-201ENSMUST00000087399 12209 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Cfap53Q9D439 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cfap53Q9D439 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cfap53Q9D439 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Cfap53Q9D439 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Cfap53Q9D439 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cfap53Q9D439 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cfap53Q9D439 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Cfap53Q9D439 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Cfap53Q9D439 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC12.58□□□□□ -0.4
Cfap53Q9D439 Gm5732-201ENSMUST00000182596 1007 ntBASIC12.58□□□□□ -0.4
Cfap53Q9D439 Gm5733-201ENSMUST00000190232 939 ntBASIC12.58□□□□□ -0.4
Cfap53Q9D439 Gm6157-201ENSMUST00000199935 1897 ntBASIC12.58□□□□□ -0.4
Cfap53Q9D439 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC12.58□□□□□ -0.4
Cfap53Q9D439 AC211878.3-201ENSMUST00000222629 2018 ntBASIC12.58□□□□□ -0.4
Cfap53Q9D439 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cfap53Q9D439 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cfap53Q9D439 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Cfap53Q9D439 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cfap53Q9D439 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cfap53Q9D439 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Cfap53Q9D439 AC113441.2-201ENSMUST00000221538 1468 ntBASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 62.1 ms