Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC12.07□□□□□ -0.48
Ddx56Q9D0R4 Gm12407-201ENSMUST00000180219 324 ntBASIC12.07□□□□□ -0.48
Ddx56Q9D0R4 Gm5732-201ENSMUST00000182596 1007 ntBASIC12.07□□□□□ -0.48
Ddx56Q9D0R4 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ddx56Q9D0R4 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ddx56Q9D0R4 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Ddx56Q9D0R4 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ddx56Q9D0R4 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ddx56Q9D0R4 Gm19208-201ENSMUST00000213861 912 ntBASIC12.07□□□□□ -0.48
Ddx56Q9D0R4 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC12.07□□□□□ -0.48
Ddx56Q9D0R4 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ddx56Q9D0R4 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Ddx56Q9D0R4 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ddx56Q9D0R4 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ddx56Q9D0R4 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ddx56Q9D0R4 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Ddx56Q9D0R4 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ddx56Q9D0R4 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ddx56Q9D0R4 Gm26631-201ENSMUST00000181462 2505 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ddx56Q9D0R4 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ddx56Q9D0R4 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Ddx56Q9D0R4 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ddx56Q9D0R4 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ddx56Q9D0R4 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ddx56Q9D0R4 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ddx56Q9D0R4 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ddx56Q9D0R4 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ddx56Q9D0R4 Gm10110-202ENSMUST00000228705 3220 ntBASIC12.07□□□□□ -0.48
Ddx56Q9D0R4 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ddx56Q9D0R4 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ddx56Q9D0R4 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ddx56Q9D0R4 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ddx56Q9D0R4 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ddx56Q9D0R4 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ddx56Q9D0R4 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ddx56Q9D0R4 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Ddx56Q9D0R4 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ddx56Q9D0R4 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ddx56Q9D0R4 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ddx56Q9D0R4 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ddx56Q9D0R4 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ddx56Q9D0R4 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ddx56Q9D0R4 Mir680-2-201ENSMUST00000102163 110 ntBASIC12.06□□□□□ -0.48
Ddx56Q9D0R4 Gm23251-201ENSMUST00000103773 110 ntBASIC12.06□□□□□ -0.48
Ddx56Q9D0R4 Gm12247-201ENSMUST00000117585 670 ntBASIC12.06□□□□□ -0.48
Ddx56Q9D0R4 Gm4909-201ENSMUST00000118749 794 ntBASIC12.06□□□□□ -0.48
Ddx56Q9D0R4 Gm6506-201ENSMUST00000119775 1136 ntBASIC12.06□□□□□ -0.48
Ddx56Q9D0R4 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC12.06□□□□□ -0.48
Ddx56Q9D0R4 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC12.06□□□□□ -0.48
Ddx56Q9D0R4 4631405K08Rik-201ENSMUST00000180420 2112 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ddx56Q9D0R4 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ddx56Q9D0R4 Gm37246-201ENSMUST00000192665 835 ntBASIC12.06□□□□□ -0.48
Ddx56Q9D0R4 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ddx56Q9D0R4 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Ddx56Q9D0R4 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC12.06□□□□□ -0.48
Ddx56Q9D0R4 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ddx56Q9D0R4 Adgrv1-214ENSMUST00000224088 1492 ntBASIC12.06□□□□□ -0.48
Ddx56Q9D0R4 AC167565.1-201ENSMUST00000226980 1833 ntBASIC12.06□□□□□ -0.48
Ddx56Q9D0R4 Btrc-209ENSMUST00000224478 2194 ntBASIC12.06□□□□□ -0.48
Ddx56Q9D0R4 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
Ddx56Q9D0R4 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ddx56Q9D0R4 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ddx56Q9D0R4 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ddx56Q9D0R4 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ddx56Q9D0R4 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Ddx56Q9D0R4 Gm6560-201ENSMUST00000198588 1591 ntBASIC12.05□□□□□ -0.48
Ddx56Q9D0R4 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
Ddx56Q9D0R4 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ddx56Q9D0R4 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ddx56Q9D0R4 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC12.05□□□□□ -0.48
Ddx56Q9D0R4 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Ddx56Q9D0R4 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ddx56Q9D0R4 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Ddx56Q9D0R4 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Ddx56Q9D0R4 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ddx56Q9D0R4 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ddx56Q9D0R4 Gm38055-201ENSMUST00000195353 2217 ntBASIC12.05□□□□□ -0.48
Ddx56Q9D0R4 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ddx56Q9D0R4 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ddx56Q9D0R4 Gm14193-201ENSMUST00000105067 153 ntBASIC12.05□□□□□ -0.48
Ddx56Q9D0R4 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ddx56Q9D0R4 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ddx56Q9D0R4 Gm13326-201ENSMUST00000118730 1011 ntBASIC12.05□□□□□ -0.48
Ddx56Q9D0R4 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC12.05□□□□□ -0.48
Ddx56Q9D0R4 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ddx56Q9D0R4 Gm24844-201ENSMUST00000158679 127 ntBASIC12.05□□□□□ -0.48
Ddx56Q9D0R4 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC12.05□□□□□ -0.48
Ddx56Q9D0R4 Gm6397-201ENSMUST00000161973 1069 ntBASIC12.05□□□□□ -0.48
Ddx56Q9D0R4 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ddx56Q9D0R4 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC12.05□□□□□ -0.48
Ddx56Q9D0R4 Gm44136-201ENSMUST00000203819 1106 ntBASIC12.05□□□□□ -0.48
Ddx56Q9D0R4 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC12.05□□□□□ -0.48
Ddx56Q9D0R4 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC12.05□□□□□ -0.48
Ddx56Q9D0R4 Gm1821-202ENSMUST00000227415 750 ntBASIC12.05□□□□□ -0.48
Ddx56Q9D0R4 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ddx56Q9D0R4 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ddx56Q9D0R4 Gm7551-201ENSMUST00000089593 1074 ntBASIC12.05□□□□□ -0.48
Ddx56Q9D0R4 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ddx56Q9D0R4 Gm5740-201ENSMUST00000211003 1857 ntBASIC12.05□□□□□ -0.48
Ddx56Q9D0R4 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms