Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Sdk1-201ENSMUST00000074546 7063 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Trim13Q9CYB0 Calhm2-201ENSMUST00000035822 2458 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trim13Q9CYB0 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trim13Q9CYB0 AC159195.3-201ENSMUST00000225162 2211 ntBASIC10.61□□□□□ -0.71
Trim13Q9CYB0 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trim13Q9CYB0 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC10.61□□□□□ -0.71
Trim13Q9CYB0 Nav2-204ENSMUST00000183659 7765 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Trim13Q9CYB0 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trim13Q9CYB0 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC10.61□□□□□ -0.71
Trim13Q9CYB0 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Trim13Q9CYB0 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trim13Q9CYB0 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trim13Q9CYB0 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Trim13Q9CYB0 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trim13Q9CYB0 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Trim13Q9CYB0 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Trim13Q9CYB0 Celsr2-201ENSMUST00000090558 10598 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trim13Q9CYB0 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trim13Q9CYB0 Aen-203ENSMUST00000107425 4956 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trim13Q9CYB0 Lrtm2-204ENSMUST00000168793 3407 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Trim13Q9CYB0 Kif19a-201ENSMUST00000084368 3433 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trim13Q9CYB0 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trim13Q9CYB0 Adcy7-202ENSMUST00000168545 5937 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trim13Q9CYB0 Gm7841-201ENSMUST00000122108 1629 ntBASIC10.6□□□□□ -0.71
Trim13Q9CYB0 AC167669.2-201ENSMUST00000224417 1620 ntBASIC10.6□□□□□ -0.71
Trim13Q9CYB0 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trim13Q9CYB0 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC10.6□□□□□ -0.71
Trim13Q9CYB0 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Trim13Q9CYB0 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Trim13Q9CYB0 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC10.6□□□□□ -0.71
Trim13Q9CYB0 Gm38002-201ENSMUST00000193255 180 ntBASIC10.6□□□□□ -0.71
Trim13Q9CYB0 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Trim13Q9CYB0 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Trim13Q9CYB0 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trim13Q9CYB0 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trim13Q9CYB0 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trim13Q9CYB0 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
Trim13Q9CYB0 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
Trim13Q9CYB0 Flicr-201ENSMUST00000144719 3455 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Trim13Q9CYB0 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Trim13Q9CYB0 Cadm2-201ENSMUST00000114292 9564 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trim13Q9CYB0 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Trim13Q9CYB0 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trim13Q9CYB0 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trim13Q9CYB0 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trim13Q9CYB0 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Trim13Q9CYB0 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC10.6□□□□□ -0.71
Trim13Q9CYB0 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trim13Q9CYB0 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
Trim13Q9CYB0 Ncor2-201ENSMUST00000055256 7780 ntAPPRIS ALT2 TSL 2 BASIC10.6□□□□□ -0.71
Trim13Q9CYB0 Trmt44-201ENSMUST00000030980 3790 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trim13Q9CYB0 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Trim13Q9CYB0 Gm26540-201ENSMUST00000181858 1310 ntTSL 5 BASIC10.59□□□□□ -0.71
Trim13Q9CYB0 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Trim13Q9CYB0 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trim13Q9CYB0 H2-T24-201ENSMUST00000113760 2182 ntAPPRIS P1 TSL 2 BASIC10.59□□□□□ -0.71
Trim13Q9CYB0 Gm42141-201ENSMUST00000196534 2172 ntBASIC10.59□□□□□ -0.71
Trim13Q9CYB0 Plxna3-201ENSMUST00000004326 6943 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trim13Q9CYB0 Plekhg4-203ENSMUST00000160191 3339 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Trim13Q9CYB0 Srsf6-203ENSMUST00000130411 3527 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trim13Q9CYB0 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trim13Q9CYB0 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trim13Q9CYB0 Gm11531-201ENSMUST00000117614 555 ntBASIC10.59□□□□□ -0.71
Trim13Q9CYB0 Gm13326-201ENSMUST00000118730 1011 ntBASIC10.59□□□□□ -0.71
Trim13Q9CYB0 Gm12329-201ENSMUST00000120829 1007 ntBASIC10.59□□□□□ -0.71
Trim13Q9CYB0 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC10.59□□□□□ -0.71
Trim13Q9CYB0 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC10.59□□□□□ -0.71
Trim13Q9CYB0 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC10.59□□□□□ -0.71
Trim13Q9CYB0 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC10.59□□□□□ -0.71
Trim13Q9CYB0 Gm43118-201ENSMUST00000199149 775 ntBASIC10.59□□□□□ -0.71
Trim13Q9CYB0 Gm45880-201ENSMUST00000213041 853 ntBASIC10.59□□□□□ -0.71
Trim13Q9CYB0 AC113031.8-201ENSMUST00000227856 631 ntBASIC10.59□□□□□ -0.71
Trim13Q9CYB0 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trim13Q9CYB0 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trim13Q9CYB0 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
Trim13Q9CYB0 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC10.59□□□□□ -0.71
Trim13Q9CYB0 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trim13Q9CYB0 Cyp2s1-202ENSMUST00000108395 3161 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Trim13Q9CYB0 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trim13Q9CYB0 Mcm3ap-201ENSMUST00000170795 6427 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trim13Q9CYB0 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trim13Q9CYB0 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Trim13Q9CYB0 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC10.59□□□□□ -0.71
Trim13Q9CYB0 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Trim13Q9CYB0 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC10.59□□□□□ -0.71
Trim13Q9CYB0 Sod3-201ENSMUST00000101208 3738 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trim13Q9CYB0 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trim13Q9CYB0 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC10.59□□□□□ -0.71
Trim13Q9CYB0 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trim13Q9CYB0 Ncdn-201ENSMUST00000030637 3681 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trim13Q9CYB0 Tti2-204ENSMUST00000210129 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.71
Trim13Q9CYB0 Zmynd8-221ENSMUST00000177633 5093 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trim13Q9CYB0 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC10.58□□□□□ -0.72
Trim13Q9CYB0 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trim13Q9CYB0 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Trim13Q9CYB0 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trim13Q9CYB0 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trim13Q9CYB0 AI854703-201ENSMUST00000095938 3517 ntAPPRIS P1 TSL 2 BASIC10.58□□□□□ -0.72
Trim13Q9CYB0 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trim13Q9CYB0 Arsb-201ENSMUST00000091403 4038 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms