Protein–RNA interactions for Protein: Q9CQ71

Rpa3, Replication protein A 14 kDa subunit, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3Q9CQ71 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rpa3Q9CQ71 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rpa3Q9CQ71 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Rpa3Q9CQ71 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC12.12□□□□□ -0.47
Rpa3Q9CQ71 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rpa3Q9CQ71 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC12.12□□□□□ -0.47
Rpa3Q9CQ71 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC12.12□□□□□ -0.47
Rpa3Q9CQ71 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC12.12□□□□□ -0.47
Rpa3Q9CQ71 Gm7150-201ENSMUST00000122032 981 ntBASIC12.12□□□□□ -0.47
Rpa3Q9CQ71 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rpa3Q9CQ71 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC12.12□□□□□ -0.47
Rpa3Q9CQ71 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC12.12□□□□□ -0.47
Rpa3Q9CQ71 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rpa3Q9CQ71 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rpa3Q9CQ71 Gm20495-201ENSMUST00000173902 235 ntBASIC12.12□□□□□ -0.47
Rpa3Q9CQ71 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC12.12□□□□□ -0.47
Rpa3Q9CQ71 Gm44008-201ENSMUST00000204345 412 ntBASIC12.12□□□□□ -0.47
Rpa3Q9CQ71 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Rpa3Q9CQ71 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rpa3Q9CQ71 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Rpa3Q9CQ71 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC12.12□□□□□ -0.47
Rpa3Q9CQ71 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rpa3Q9CQ71 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rpa3Q9CQ71 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rpa3Q9CQ71 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rpa3Q9CQ71 Gm45496-201ENSMUST00000209918 2917 ntBASIC12.12□□□□□ -0.47
Rpa3Q9CQ71 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rpa3Q9CQ71 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rpa3Q9CQ71 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC12.12□□□□□ -0.47
Rpa3Q9CQ71 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rpa3Q9CQ71 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rpa3Q9CQ71 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rpa3Q9CQ71 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rpa3Q9CQ71 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rpa3Q9CQ71 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rpa3Q9CQ71 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rpa3Q9CQ71 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rpa3Q9CQ71 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rpa3Q9CQ71 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rpa3Q9CQ71 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rpa3Q9CQ71 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC12.11□□□□□ -0.47
Rpa3Q9CQ71 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rpa3Q9CQ71 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rpa3Q9CQ71 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rpa3Q9CQ71 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rpa3Q9CQ71 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rpa3Q9CQ71 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Rpa3Q9CQ71 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
Rpa3Q9CQ71 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rpa3Q9CQ71 Gm6903-201ENSMUST00000160509 1366 ntBASIC12.11□□□□□ -0.47
Rpa3Q9CQ71 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rpa3Q9CQ71 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Rpa3Q9CQ71 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rpa3Q9CQ71 Gm12247-201ENSMUST00000117585 670 ntBASIC12.11□□□□□ -0.47
Rpa3Q9CQ71 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC12.11□□□□□ -0.47
Rpa3Q9CQ71 Gm12566-201ENSMUST00000121479 359 ntBASIC12.11□□□□□ -0.47
Rpa3Q9CQ71 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC12.11□□□□□ -0.47
Rpa3Q9CQ71 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC12.11□□□□□ -0.47
Rpa3Q9CQ71 Gm24844-201ENSMUST00000158679 127 ntBASIC12.11□□□□□ -0.47
Rpa3Q9CQ71 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rpa3Q9CQ71 Mir7070-201ENSMUST00000183657 86 ntBASIC12.11□□□□□ -0.47
Rpa3Q9CQ71 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC12.11□□□□□ -0.47
Rpa3Q9CQ71 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rpa3Q9CQ71 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC12.11□□□□□ -0.47
Rpa3Q9CQ71 AC118639.2-201ENSMUST00000226289 223 ntBASIC12.11□□□□□ -0.47
Rpa3Q9CQ71 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rpa3Q9CQ71 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rpa3Q9CQ71 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Rpa3Q9CQ71 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC12.11□□□□□ -0.47
Rpa3Q9CQ71 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Rpa3Q9CQ71 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rpa3Q9CQ71 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Rpa3Q9CQ71 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rpa3Q9CQ71 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Rpa3Q9CQ71 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Rpa3Q9CQ71 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rpa3Q9CQ71 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Rpa3Q9CQ71 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rpa3Q9CQ71 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rpa3Q9CQ71 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rpa3Q9CQ71 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Rpa3Q9CQ71 Gm37122-201ENSMUST00000195313 1567 ntBASIC12.1□□□□□ -0.47
Rpa3Q9CQ71 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rpa3Q9CQ71 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rpa3Q9CQ71 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rpa3Q9CQ71 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rpa3Q9CQ71 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rpa3Q9CQ71 AC165351.1-201ENSMUST00000219078 2020 ntBASIC12.1□□□□□ -0.47
Rpa3Q9CQ71 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rpa3Q9CQ71 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rpa3Q9CQ71 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rpa3Q9CQ71 Gm22920-201ENSMUST00000102175 109 ntBASIC12.1□□□□□ -0.47
Rpa3Q9CQ71 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rpa3Q9CQ71 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC12.1□□□□□ -0.47
Rpa3Q9CQ71 Gm7666-201ENSMUST00000146631 819 ntBASIC12.1□□□□□ -0.47
Rpa3Q9CQ71 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Rpa3Q9CQ71 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rpa3Q9CQ71 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rpa3Q9CQ71 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC12.1□□□□□ -0.47
Rpa3Q9CQ71 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms