Protein–RNA interactions for Protein: Q99PV0

Prpf8, Pre-mRNA-processing-splicing factor 8, mousemouse

Known RBP Predictions only

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf8Q99PV0 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Prpf8Q99PV0 Gm13267-201ENSMUST00000142787 698 ntTSL 3 BASIC9.42□□□□□ -0.9
Prpf8Q99PV0 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Prpf8Q99PV0 Gm28937-201ENSMUST00000185413 695 ntBASIC9.42□□□□□ -0.9
Prpf8Q99PV0 Gm29400-201ENSMUST00000187208 695 ntBASIC9.42□□□□□ -0.9
Prpf8Q99PV0 Gm28662-201ENSMUST00000188446 695 ntBASIC9.42□□□□□ -0.9
Prpf8Q99PV0 Gm28251-201ENSMUST00000188835 695 ntBASIC9.42□□□□□ -0.9
Prpf8Q99PV0 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Prpf8Q99PV0 Gm37318-201ENSMUST00000194325 695 ntBASIC9.42□□□□□ -0.9
Prpf8Q99PV0 Gm38017-201ENSMUST00000194768 695 ntBASIC9.42□□□□□ -0.9
Prpf8Q99PV0 Gm37287-201ENSMUST00000195449 695 ntBASIC9.42□□□□□ -0.9
Prpf8Q99PV0 Gm37793-201ENSMUST00000195548 695 ntBASIC9.42□□□□□ -0.9
Prpf8Q99PV0 Tcf25-210ENSMUST00000212880 827 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Prpf8Q99PV0 Olfr692-202ENSMUST00000217827 1126 ntBASIC9.42□□□□□ -0.9
Prpf8Q99PV0 AC122346.3-201ENSMUST00000223983 306 ntBASIC9.42□□□□□ -0.9
Prpf8Q99PV0 Actg1-201ENSMUST00000062147 876 ntTSL 3 BASIC9.42□□□□□ -0.9
Prpf8Q99PV0 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC9.42□□□□□ -0.9
Prpf8Q99PV0 Olfr692-201ENSMUST00000098152 1126 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
Prpf8Q99PV0 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
Prpf8Q99PV0 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Prpf8Q99PV0 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Prpf8Q99PV0 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Prpf8Q99PV0 Htr1b-202ENSMUST00000183482 4724 ntAPPRIS P1 TSL 3 BASIC9.42□□□□□ -0.9
Prpf8Q99PV0 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Prpf8Q99PV0 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Prpf8Q99PV0 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Prpf8Q99PV0 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Prpf8Q99PV0 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC9.42□□□□□ -0.9
Prpf8Q99PV0 Zzef1-208ENSMUST00000207107 11306 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Prpf8Q99PV0 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Prpf8Q99PV0 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Prpf8Q99PV0 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
Prpf8Q99PV0 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Prpf8Q99PV0 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Prpf8Q99PV0 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Prpf8Q99PV0 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Prpf8Q99PV0 Gm24791-201ENSMUST00000104284 131 ntBASIC9.42□□□□□ -0.9
Prpf8Q99PV0 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC9.42□□□□□ -0.9
Prpf8Q99PV0 Gm10169-201ENSMUST00000121822 348 ntBASIC9.42□□□□□ -0.9
Prpf8Q99PV0 Gm9089-201ENSMUST00000122027 526 ntBASIC9.42□□□□□ -0.9
Prpf8Q99PV0 Gm20414-201ENSMUST00000172918 646 ntBASIC9.42□□□□□ -0.9
Prpf8Q99PV0 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC9.42□□□□□ -0.9
Prpf8Q99PV0 Tmbim7-204ENSMUST00000198739 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Prpf8Q99PV0 Gm43912-201ENSMUST00000204352 538 ntBASIC9.42□□□□□ -0.9
Prpf8Q99PV0 Gm44507-201ENSMUST00000206249 343 ntTSL 5 BASIC9.42□□□□□ -0.9
Prpf8Q99PV0 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC9.42□□□□□ -0.9
Prpf8Q99PV0 AC114645.1-201ENSMUST00000215831 187 ntBASIC9.42□□□□□ -0.9
Prpf8Q99PV0 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Prpf8Q99PV0 CT009536.2-201ENSMUST00000225370 665 ntBASIC9.42□□□□□ -0.9
Prpf8Q99PV0 Arhgef33-210ENSMUST00000225548 456 ntBASIC9.42□□□□□ -0.9
Prpf8Q99PV0 CT573086.4-201ENSMUST00000226729 342 ntBASIC9.42□□□□□ -0.9
Prpf8Q99PV0 Prss3-201ENSMUST00000096003 822 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Prpf8Q99PV0 Gm44190-201ENSMUST00000205083 1401 ntBASIC9.42□□□□□ -0.9
Prpf8Q99PV0 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Prpf8Q99PV0 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Prpf8Q99PV0 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Prpf8Q99PV0 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Prpf8Q99PV0 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC9.41□□□□□ -0.9
Prpf8Q99PV0 AC156031.2-201ENSMUST00000213107 3310 ntBASIC9.41□□□□□ -0.9
Prpf8Q99PV0 Chac2-202ENSMUST00000101394 1315 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
Prpf8Q99PV0 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC9.41□□□□□ -0.9
Prpf8Q99PV0 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Prpf8Q99PV0 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Prpf8Q99PV0 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
Prpf8Q99PV0 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Prpf8Q99PV0 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC9.41□□□□□ -0.9
Prpf8Q99PV0 Kyat1-202ENSMUST00000113659 1367 ntTSL 5 BASIC9.41□□□□□ -0.9
Prpf8Q99PV0 Gm13347-201ENSMUST00000120298 1353 ntBASIC9.41□□□□□ -0.9
Prpf8Q99PV0 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC9.41□□□□□ -0.9
Prpf8Q99PV0 Zfp324-201ENSMUST00000038701 4315 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Prpf8Q99PV0 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Prpf8Q99PV0 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC9.41□□□□□ -0.9
Prpf8Q99PV0 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Prpf8Q99PV0 Gm7224-201ENSMUST00000121359 2066 ntBASIC9.41□□□□□ -0.9
Prpf8Q99PV0 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Prpf8Q99PV0 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC9.41□□□□□ -0.9
Prpf8Q99PV0 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC9.41□□□□□ -0.9
Prpf8Q99PV0 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Prpf8Q99PV0 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Prpf8Q99PV0 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC9.41□□□□□ -0.9
Prpf8Q99PV0 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
Prpf8Q99PV0 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC9.41□□□□□ -0.9
Prpf8Q99PV0 AC238811.4-201ENSMUST00000178019 1246 ntBASIC9.41□□□□□ -0.9
Prpf8Q99PV0 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Prpf8Q99PV0 AC238940.3-201ENSMUST00000178830 1246 ntBASIC9.41□□□□□ -0.9
Prpf8Q99PV0 Gm9116-201ENSMUST00000192400 1018 ntBASIC9.41□□□□□ -0.9
Prpf8Q99PV0 Gm18706-201ENSMUST00000210053 1066 ntBASIC9.41□□□□□ -0.9
Prpf8Q99PV0 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Prpf8Q99PV0 CT009527.1-201ENSMUST00000224205 339 ntBASIC9.41□□□□□ -0.9
Prpf8Q99PV0 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Prpf8Q99PV0 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Prpf8Q99PV0 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Prpf8Q99PV0 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Prpf8Q99PV0 Atxn2l-206ENSMUST00000206577 3894 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
Prpf8Q99PV0 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Prpf8Q99PV0 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Prpf8Q99PV0 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Prpf8Q99PV0 Prom2-202ENSMUST00000103214 4190 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Prpf8Q99PV0 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC9.41□□□□□ -0.9
Prpf8Q99PV0 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms