Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trim16Q99PP9 AC113441.2-201ENSMUST00000221538 1468 ntBASIC11.24□□□□□ -0.61
Trim16Q99PP9 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Trim16Q99PP9 Pcdh18-201ENSMUST00000035931 5168 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trim16Q99PP9 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trim16Q99PP9 Trmt44-201ENSMUST00000030980 3790 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trim16Q99PP9 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trim16Q99PP9 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trim16Q99PP9 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trim16Q99PP9 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trim16Q99PP9 Son-202ENSMUST00000114037 8399 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trim16Q99PP9 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trim16Q99PP9 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trim16Q99PP9 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trim16Q99PP9 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC11.23□□□□□ -0.61
Trim16Q99PP9 Vwa5b2-202ENSMUST00000096197 4527 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Trim16Q99PP9 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trim16Q99PP9 AC138329.2-201ENSMUST00000225579 1842 ntBASIC11.23□□□□□ -0.61
Trim16Q99PP9 AC166359.1-201ENSMUST00000220243 1871 ntBASIC11.23□□□□□ -0.61
Trim16Q99PP9 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Trim16Q99PP9 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trim16Q99PP9 Mical2-202ENSMUST00000050149 6669 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trim16Q99PP9 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC11.23□□□□□ -0.61
Trim16Q99PP9 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
Trim16Q99PP9 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trim16Q99PP9 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC11.23□□□□□ -0.61
Trim16Q99PP9 Abca3-203ENSMUST00000117337 5202 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trim16Q99PP9 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Trim16Q99PP9 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC11.23□□□□□ -0.61
Trim16Q99PP9 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trim16Q99PP9 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trim16Q99PP9 Peg3-201ENSMUST00000051209 8694 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trim16Q99PP9 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trim16Q99PP9 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trim16Q99PP9 Gm7857-201ENSMUST00000117957 358 ntBASIC11.23□□□□□ -0.61
Trim16Q99PP9 Gm16481-201ENSMUST00000119074 1227 ntBASIC11.23□□□□□ -0.61
Trim16Q99PP9 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Trim16Q99PP9 Gm11660-201ENSMUST00000120955 412 ntBASIC11.23□□□□□ -0.61
Trim16Q99PP9 Gm6039-201ENSMUST00000121667 1250 ntBASIC11.23□□□□□ -0.61
Trim16Q99PP9 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC11.23□□□□□ -0.61
Trim16Q99PP9 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trim16Q99PP9 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trim16Q99PP9 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trim16Q99PP9 Gm28450-201ENSMUST00000187349 638 ntBASIC11.23□□□□□ -0.61
Trim16Q99PP9 Gm19287-201ENSMUST00000203190 358 ntBASIC11.23□□□□□ -0.61
Trim16Q99PP9 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC11.23□□□□□ -0.61
Trim16Q99PP9 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Trim16Q99PP9 Gm5363-201ENSMUST00000211927 938 ntBASIC11.23□□□□□ -0.61
Trim16Q99PP9 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trim16Q99PP9 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Trim16Q99PP9 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trim16Q99PP9 Gm26448-201ENSMUST00000082446 203 ntBASIC11.23□□□□□ -0.61
Trim16Q99PP9 Dip2a-205ENSMUST00000160048 6551 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Trim16Q99PP9 AC093022.4-203ENSMUST00000228523 2657 ntBASIC11.23□□□□□ -0.61
Trim16Q99PP9 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trim16Q99PP9 AC108858.2-201ENSMUST00000228186 1425 ntBASIC11.23□□□□□ -0.61
Trim16Q99PP9 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trim16Q99PP9 Gm9072-201ENSMUST00000218390 1514 ntBASIC11.23□□□□□ -0.61
Trim16Q99PP9 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trim16Q99PP9 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trim16Q99PP9 Gmps-201ENSMUST00000029405 8105 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trim16Q99PP9 Camk2a-203ENSMUST00000102888 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trim16Q99PP9 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trim16Q99PP9 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trim16Q99PP9 Wdr78-203ENSMUST00000106868 4045 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Trim16Q99PP9 Nfx1-203ENSMUST00000098143 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trim16Q99PP9 Scyl2-204ENSMUST00000174252 4817 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trim16Q99PP9 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC11.22□□□□□ -0.61
Trim16Q99PP9 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trim16Q99PP9 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trim16Q99PP9 Slc45a4-202ENSMUST00000076224 4240 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trim16Q99PP9 AI593442-201ENSMUST00000098768 5615 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trim16Q99PP9 Gm23596-201ENSMUST00000104304 132 ntBASIC11.22□□□□□ -0.61
Trim16Q99PP9 Gm23200-201ENSMUST00000104379 132 ntBASIC11.22□□□□□ -0.61
Trim16Q99PP9 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trim16Q99PP9 Pik3cd-202ENSMUST00000105688 4335 ntAPPRIS ALT1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trim16Q99PP9 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trim16Q99PP9 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC11.22□□□□□ -0.61
Trim16Q99PP9 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC11.22□□□□□ -0.61
Trim16Q99PP9 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trim16Q99PP9 Gm14441-201ENSMUST00000121960 540 ntBASIC11.22□□□□□ -0.61
Trim16Q99PP9 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trim16Q99PP9 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC11.22□□□□□ -0.61
Trim16Q99PP9 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC11.22□□□□□ -0.61
Trim16Q99PP9 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trim16Q99PP9 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trim16Q99PP9 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trim16Q99PP9 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trim16Q99PP9 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
Trim16Q99PP9 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Trim16Q99PP9 Gm16505-201ENSMUST00000179981 232 ntBASIC11.22□□□□□ -0.61
Trim16Q99PP9 Gm9034-201ENSMUST00000182071 1005 ntBASIC11.22□□□□□ -0.61
Trim16Q99PP9 Gm27552-201ENSMUST00000183351 62 ntBASIC11.22□□□□□ -0.61
Trim16Q99PP9 Gm27844-201ENSMUST00000183613 62 ntBASIC11.22□□□□□ -0.61
Trim16Q99PP9 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trim16Q99PP9 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trim16Q99PP9 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
Trim16Q99PP9 Gm9797-202ENSMUST00000218003 294 ntBASIC11.22□□□□□ -0.61
Trim16Q99PP9 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trim16Q99PP9 CT025694.1-201ENSMUST00000226188 934 ntBASIC11.22□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms