Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Lgals9-203ENSMUST00000108269 1586 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdh15Q99PJ1 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC12.67□□□□□ -0.38
Pcdh15Q99PJ1 Myc-204ENSMUST00000160009 1765 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdh15Q99PJ1 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdh15Q99PJ1 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdh15Q99PJ1 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdh15Q99PJ1 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdh15Q99PJ1 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdh15Q99PJ1 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdh15Q99PJ1 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdh15Q99PJ1 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdh15Q99PJ1 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdh15Q99PJ1 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdh15Q99PJ1 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdh15Q99PJ1 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdh15Q99PJ1 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdh15Q99PJ1 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdh15Q99PJ1 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdh15Q99PJ1 AC160060.1-201ENSMUST00000217840 1813 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdh15Q99PJ1 Ppid-201ENSMUST00000029382 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdh15Q99PJ1 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdh15Q99PJ1 Gm36211-201ENSMUST00000198171 1497 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdh15Q99PJ1 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdh15Q99PJ1 Paip2-202ENSMUST00000115734 815 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Pcdh15Q99PJ1 Gm6939-201ENSMUST00000122029 864 ntBASIC12.66□□□□□ -0.38
Pcdh15Q99PJ1 Tsc22d3-204ENSMUST00000123898 952 ntTSL 5 BASIC12.66□□□□□ -0.38
Pcdh15Q99PJ1 Tsc22d1-207ENSMUST00000140251 670 ntTSL 2 BASIC12.66□□□□□ -0.38
Pcdh15Q99PJ1 Gm3115-202ENSMUST00000177660 618 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Pcdh15Q99PJ1 Gm6337-203ENSMUST00000177662 618 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Pcdh15Q99PJ1 Gm3727-202ENSMUST00000178251 618 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Pcdh15Q99PJ1 Gm42133-201ENSMUST00000196076 637 ntTSL 3 BASIC12.66□□□□□ -0.38
Pcdh15Q99PJ1 Cldnd2-202ENSMUST00000206839 583 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Pcdh15Q99PJ1 Gm33570-201ENSMUST00000207608 1254 ntTSL 5 BASIC12.66□□□□□ -0.38
Pcdh15Q99PJ1 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdh15Q99PJ1 AC102327.1-201ENSMUST00000226389 742 ntBASIC12.66□□□□□ -0.38
Pcdh15Q99PJ1 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdh15Q99PJ1 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdh15Q99PJ1 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC12.66□□□□□ -0.38
Pcdh15Q99PJ1 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdh15Q99PJ1 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdh15Q99PJ1 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Pcdh15Q99PJ1 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdh15Q99PJ1 Mettl8-201ENSMUST00000090849 1842 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdh15Q99PJ1 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdh15Q99PJ1 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC12.66□□□□□ -0.38
Pcdh15Q99PJ1 Amd-ps3-201ENSMUST00000072796 1496 ntBASIC12.66□□□□□ -0.38
Pcdh15Q99PJ1 Kcnma1-207ENSMUST00000172099 3354 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Pcdh15Q99PJ1 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Pcdh15Q99PJ1 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdh15Q99PJ1 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdh15Q99PJ1 Mir291b-201ENSMUST00000104838 79 ntBASIC12.66□□□□□ -0.38
Pcdh15Q99PJ1 Cenpx-204ENSMUST00000106155 700 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdh15Q99PJ1 Gm45716-201ENSMUST00000124877 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdh15Q99PJ1 Stk33-205ENSMUST00000141210 949 ntTSL 3 BASIC12.66□□□□□ -0.38
Pcdh15Q99PJ1 Stamos-201ENSMUST00000152524 801 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdh15Q99PJ1 Platr17-201ENSMUST00000172817 807 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdh15Q99PJ1 Mir3091-201ENSMUST00000175086 76 ntBASIC12.66□□□□□ -0.38
Pcdh15Q99PJ1 Gm22662-201ENSMUST00000175290 256 ntBASIC12.66□□□□□ -0.38
Pcdh15Q99PJ1 Gm38145-201ENSMUST00000192319 693 ntBASIC12.66□□□□□ -0.38
Pcdh15Q99PJ1 Gm37009-201ENSMUST00000193297 361 ntBASIC12.66□□□□□ -0.38
Pcdh15Q99PJ1 Gm6370-202ENSMUST00000198912 1017 ntAPPRIS ALT2 TSL 3 BASIC12.66□□□□□ -0.38
Pcdh15Q99PJ1 CAAA01125382.3-201ENSMUST00000215277 643 ntBASIC12.66□□□□□ -0.38
Pcdh15Q99PJ1 AC165260.2-201ENSMUST00000225371 395 ntBASIC12.66□□□□□ -0.38
Pcdh15Q99PJ1 Mrps18b-201ENSMUST00000025305 1079 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdh15Q99PJ1 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdh15Q99PJ1 Ces2h-201ENSMUST00000172032 2445 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Pcdh15Q99PJ1 B4galnt2-201ENSMUST00000038343 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdh15Q99PJ1 Gm30504-201ENSMUST00000209316 1688 ntTSL 5 BASIC12.65□□□□□ -0.38
Pcdh15Q99PJ1 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdh15Q99PJ1 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC12.65□□□□□ -0.38
Pcdh15Q99PJ1 Gm29245-201ENSMUST00000187332 1416 ntBASIC12.65□□□□□ -0.38
Pcdh15Q99PJ1 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdh15Q99PJ1 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdh15Q99PJ1 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC12.65□□□□□ -0.38
Pcdh15Q99PJ1 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdh15Q99PJ1 Cd247-205ENSMUST00000161559 1816 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdh15Q99PJ1 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdh15Q99PJ1 Rpl17-ps1-201ENSMUST00000119156 552 ntBASIC12.65□□□□□ -0.38
Pcdh15Q99PJ1 Gm14231-201ENSMUST00000120090 592 ntBASIC12.65□□□□□ -0.38
Pcdh15Q99PJ1 Gm12136-201ENSMUST00000120460 1209 ntBASIC12.65□□□□□ -0.38
Pcdh15Q99PJ1 1700095J12Rik-201ENSMUST00000124620 737 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdh15Q99PJ1 Gm13393-201ENSMUST00000141935 396 ntTSL 5 BASIC12.65□□□□□ -0.38
Pcdh15Q99PJ1 Gm16755-201ENSMUST00000180595 933 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdh15Q99PJ1 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC12.65□□□□□ -0.38
Pcdh15Q99PJ1 CT025679.1-201ENSMUST00000227106 449 ntBASIC12.65□□□□□ -0.38
Pcdh15Q99PJ1 Gm23458-201ENSMUST00000083257 169 ntBASIC12.65□□□□□ -0.38
Pcdh15Q99PJ1 Cpeb1-209ENSMUST00000178892 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdh15Q99PJ1 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdh15Q99PJ1 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
Pcdh15Q99PJ1 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdh15Q99PJ1 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdh15Q99PJ1 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC12.65□□□□□ -0.38
Pcdh15Q99PJ1 Lims1-201ENSMUST00000020077 1565 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdh15Q99PJ1 Fcrl1-206ENSMUST00000194786 1540 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdh15Q99PJ1 Atf3-203ENSMUST00000195117 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdh15Q99PJ1 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Pcdh15Q99PJ1 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Pcdh15Q99PJ1 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Pcdh15Q99PJ1 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Pcdh15Q99PJ1 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms