Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC11.31□□□□□ -0.6
Cdh23Q99PF4 AC134860.2-201ENSMUST00000225277 1036 ntBASIC11.31□□□□□ -0.6
Cdh23Q99PF4 Mrps18b-201ENSMUST00000025305 1079 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cdh23Q99PF4 Gm8186-201ENSMUST00000053575 386 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Cdh23Q99PF4 Fabp1-201ENSMUST00000067492 553 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cdh23Q99PF4 Gm25514-201ENSMUST00000083860 135 ntBASIC11.31□□□□□ -0.6
Cdh23Q99PF4 Adgre5-202ENSMUST00000075843 3000 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cdh23Q99PF4 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cdh23Q99PF4 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cdh23Q99PF4 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cdh23Q99PF4 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cdh23Q99PF4 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cdh23Q99PF4 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cdh23Q99PF4 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cdh23Q99PF4 Cap2-202ENSMUST00000119341 2454 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cdh23Q99PF4 Mak16-201ENSMUST00000033983 1902 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cdh23Q99PF4 C130083M11Rik-201ENSMUST00000197171 2072 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Cdh23Q99PF4 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cdh23Q99PF4 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cdh23Q99PF4 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC11.3□□□□□ -0.6
Cdh23Q99PF4 Mtch2-202ENSMUST00000111467 2281 ntTSL 5 BASIC11.3□□□□□ -0.6
Cdh23Q99PF4 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cdh23Q99PF4 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Cdh23Q99PF4 Gm26698-201ENSMUST00000181290 971 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Cdh23Q99PF4 Gm43103-201ENSMUST00000199021 802 ntBASIC11.3□□□□□ -0.6
Cdh23Q99PF4 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Cdh23Q99PF4 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Cdh23Q99PF4 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cdh23Q99PF4 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cdh23Q99PF4 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cdh23Q99PF4 Pdcl-202ENSMUST00000112940 3056 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cdh23Q99PF4 AC160060.1-201ENSMUST00000217840 1813 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Cdh23Q99PF4 Oas1d-201ENSMUST00000044224 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cdh23Q99PF4 Slitrk4-202ENSMUST00000114679 3513 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cdh23Q99PF4 Gm35963-201ENSMUST00000211762 1425 ntTSL 5 BASIC11.3□□□□□ -0.6
Cdh23Q99PF4 Gm12796-201ENSMUST00000131864 344 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Cdh23Q99PF4 Dmtf1-201ENSMUST00000071921 3806 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cdh23Q99PF4 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Cdh23Q99PF4 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cdh23Q99PF4 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cdh23Q99PF4 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cdh23Q99PF4 1700071K01Rik-201ENSMUST00000117522 819 ntBASIC11.3□□□□□ -0.6
Cdh23Q99PF4 Olfml3-204ENSMUST00000169286 874 ntBASIC11.3□□□□□ -0.6
Cdh23Q99PF4 Gm8525-201ENSMUST00000189674 861 ntBASIC11.3□□□□□ -0.6
Cdh23Q99PF4 Gm19058-201ENSMUST00000192135 598 ntBASIC11.3□□□□□ -0.6
Cdh23Q99PF4 Gm8170-201ENSMUST00000218581 945 ntBASIC11.3□□□□□ -0.6
Cdh23Q99PF4 Gm11437-201ENSMUST00000050771 1239 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cdh23Q99PF4 Gm9869-201ENSMUST00000063858 375 ntTSL 5 BASIC11.3□□□□□ -0.6
Cdh23Q99PF4 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cdh23Q99PF4 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cdh23Q99PF4 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Cdh23Q99PF4 Prkcd-201ENSMUST00000022521 2612 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cdh23Q99PF4 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC11.29□□□□□ -0.6
Cdh23Q99PF4 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cdh23Q99PF4 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cdh23Q99PF4 Gm43773-201ENSMUST00000198548 2162 ntBASIC11.29□□□□□ -0.6
Cdh23Q99PF4 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Cdh23Q99PF4 Msrb1-202ENSMUST00000115262 886 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cdh23Q99PF4 Gm9133-201ENSMUST00000118289 540 ntBASIC11.29□□□□□ -0.6
Cdh23Q99PF4 Zfp738-202ENSMUST00000125495 712 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Cdh23Q99PF4 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Cdh23Q99PF4 Gm15952-202ENSMUST00000144542 556 ntTSL 3 BASIC11.29□□□□□ -0.6
Cdh23Q99PF4 Zfp419-201ENSMUST00000173446 916 ntBASIC11.29□□□□□ -0.6
Cdh23Q99PF4 Atad3aos-204ENSMUST00000174185 482 ntTSL 3 BASIC11.29□□□□□ -0.6
Cdh23Q99PF4 Mrip-ps-201ENSMUST00000184613 940 ntBASIC11.29□□□□□ -0.6
Cdh23Q99PF4 Gm5845-201ENSMUST00000195812 796 ntBASIC11.29□□□□□ -0.6
Cdh23Q99PF4 Fxyd7-202ENSMUST00000206341 620 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cdh23Q99PF4 Ormdl2-203ENSMUST00000219215 1051 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cdh23Q99PF4 AC107711.3-201ENSMUST00000228939 1035 ntBASIC11.29□□□□□ -0.6
Cdh23Q99PF4 Fxyd7-201ENSMUST00000073892 693 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cdh23Q99PF4 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Cdh23Q99PF4 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cdh23Q99PF4 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC11.29□□□□□ -0.6
Cdh23Q99PF4 Plekha7-206ENSMUST00000182487 3476 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Cdh23Q99PF4 Gm12716-201ENSMUST00000120606 1354 ntBASIC11.29□□□□□ -0.6
Cdh23Q99PF4 Lsamp-201ENSMUST00000078873 2951 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Cdh23Q99PF4 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cdh23Q99PF4 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cdh23Q99PF4 Gm43127-201ENSMUST00000195890 2789 ntBASIC11.29□□□□□ -0.6
Cdh23Q99PF4 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cdh23Q99PF4 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Cdh23Q99PF4 Cyp2d41-ps-201ENSMUST00000180453 1503 ntBASIC11.29□□□□□ -0.6
Cdh23Q99PF4 Gm15033-201ENSMUST00000118188 673 ntBASIC11.29□□□□□ -0.6
Cdh23Q99PF4 Gm15132-201ENSMUST00000118581 652 ntBASIC11.29□□□□□ -0.6
Cdh23Q99PF4 Gm13758-201ENSMUST00000118699 743 ntBASIC11.29□□□□□ -0.6
Cdh23Q99PF4 Rpl17-ps11-201ENSMUST00000161946 729 ntBASIC11.29□□□□□ -0.6
Cdh23Q99PF4 Scgb1b27-202ENSMUST00000173387 762 ntAPPRIS ALT2 TSL 2 BASIC11.29□□□□□ -0.6
Cdh23Q99PF4 Tspy-ps-203ENSMUST00000186546 989 ntBASIC11.29□□□□□ -0.6
Cdh23Q99PF4 Gm43851-201ENSMUST00000200726 327 ntTSL 3 BASIC11.29□□□□□ -0.6
Cdh23Q99PF4 Gm25483-201ENSMUST00000083224 227 ntBASIC11.29□□□□□ -0.6
Cdh23Q99PF4 Ntm-201ENSMUST00000075069 3022 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Cdh23Q99PF4 Zswim9-201ENSMUST00000108532 3346 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Cdh23Q99PF4 Mef2a-204ENSMUST00000107476 4759 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Cdh23Q99PF4 Cryz-201ENSMUST00000029850 2507 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cdh23Q99PF4 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cdh23Q99PF4 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Cdh23Q99PF4 AC132833.1-202ENSMUST00000228875 1690 ntBASIC11.29□□□□□ -0.6
Cdh23Q99PF4 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cdh23Q99PF4 Gm27177-202ENSMUST00000183514 2703 ntBASIC11.29□□□□□ -0.6
Cdh23Q99PF4 Gm17435-202ENSMUST00000212699 1998 ntBASIC11.28□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 61.7 ms